Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC18.98■□□□□ 0.63
Scn9aQ62205 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Scn9aQ62205 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Scn9aQ62205 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Scn9aQ62205 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Scn9aQ62205 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Scn9aQ62205 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scn9aQ62205 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scn9aQ62205 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scn9aQ62205 Gm11185-201ENSMUST00000117732 1007 ntBASIC18.97■□□□□ 0.63
Scn9aQ62205 Gm11745-201ENSMUST00000121669 448 ntBASIC18.97■□□□□ 0.63
Scn9aQ62205 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC18.97■□□□□ 0.63
Scn9aQ62205 Gm23547-201ENSMUST00000158210 271 ntBASIC18.97■□□□□ 0.63
Scn9aQ62205 Mir6990-201ENSMUST00000183724 91 ntBASIC18.97■□□□□ 0.63
Scn9aQ62205 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scn9aQ62205 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC18.97■□□□□ 0.63
Scn9aQ62205 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scn9aQ62205 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scn9aQ62205 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Scn9aQ62205 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Scn9aQ62205 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scn9aQ62205 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scn9aQ62205 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Scn9aQ62205 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Scn9aQ62205 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC18.97■□□□□ 0.63
Scn9aQ62205 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC18.97■□□□□ 0.63
Scn9aQ62205 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC18.97■□□□□ 0.63
Scn9aQ62205 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Scn9aQ62205 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC18.97■□□□□ 0.63
Scn9aQ62205 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Scn9aQ62205 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scn9aQ62205 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Scn9aQ62205 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scn9aQ62205 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scn9aQ62205 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Scn9aQ62205 Nrn1-204ENSMUST00000224323 1779 ntBASIC18.96■□□□□ 0.63
Scn9aQ62205 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scn9aQ62205 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scn9aQ62205 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC18.96■□□□□ 0.63
Scn9aQ62205 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scn9aQ62205 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scn9aQ62205 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scn9aQ62205 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scn9aQ62205 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.96■□□□□ 0.63
Scn9aQ62205 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC18.96■□□□□ 0.63
Scn9aQ62205 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scn9aQ62205 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scn9aQ62205 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scn9aQ62205 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC18.95■□□□□ 0.62
Scn9aQ62205 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC18.95■□□□□ 0.62
Scn9aQ62205 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Scn9aQ62205 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scn9aQ62205 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scn9aQ62205 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.95■□□□□ 0.62
Scn9aQ62205 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scn9aQ62205 Gm13365-201ENSMUST00000121188 973 ntBASIC18.95■□□□□ 0.62
Scn9aQ62205 Gm25948-201ENSMUST00000175334 112 ntBASIC18.95■□□□□ 0.62
Scn9aQ62205 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC18.95■□□□□ 0.62
Scn9aQ62205 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.95■□□□□ 0.62
Scn9aQ62205 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Scn9aQ62205 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scn9aQ62205 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scn9aQ62205 Gm16401-202ENSMUST00000197463 2074 ntBASIC18.95■□□□□ 0.62
Scn9aQ62205 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scn9aQ62205 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Scn9aQ62205 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Scn9aQ62205 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scn9aQ62205 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC18.94■□□□□ 0.62
Scn9aQ62205 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scn9aQ62205 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scn9aQ62205 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC18.94■□□□□ 0.62
Scn9aQ62205 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
Scn9aQ62205 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scn9aQ62205 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scn9aQ62205 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scn9aQ62205 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Scn9aQ62205 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scn9aQ62205 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Scn9aQ62205 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scn9aQ62205 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scn9aQ62205 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Scn9aQ62205 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scn9aQ62205 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.94■□□□□ 0.62
Scn9aQ62205 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scn9aQ62205 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC18.93■□□□□ 0.62
Scn9aQ62205 Gm13216-201ENSMUST00000117145 591 ntBASIC18.93■□□□□ 0.62
Scn9aQ62205 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC18.93■□□□□ 0.62
Scn9aQ62205 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
Scn9aQ62205 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC18.93■□□□□ 0.62
Scn9aQ62205 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scn9aQ62205 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Scn9aQ62205 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Scn9aQ62205 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Scn9aQ62205 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC18.93■□□□□ 0.62
Scn9aQ62205 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
Scn9aQ62205 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scn9aQ62205 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scn9aQ62205 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scn9aQ62205 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scn9aQ62205 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms