Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim27Q62158 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim27Q62158 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim27Q62158 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim27Q62158 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim27Q62158 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim27Q62158 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim27Q62158 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim27Q62158 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim27Q62158 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim27Q62158 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim27Q62158 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim27Q62158 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim27Q62158 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC19.91■□□□□ 0.78
Trim27Q62158 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Trim27Q62158 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Trim27Q62158 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
Trim27Q62158 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC19.91■□□□□ 0.78
Trim27Q62158 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Trim27Q62158 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
Trim27Q62158 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim27Q62158 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim27Q62158 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Trim27Q62158 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Trim27Q62158 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim27Q62158 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim27Q62158 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim27Q62158 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim27Q62158 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim27Q62158 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim27Q62158 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim27Q62158 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Trim27Q62158 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC19.9■□□□□ 0.78
Trim27Q62158 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim27Q62158 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trim27Q62158 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim27Q62158 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim27Q62158 Olfr129-201ENSMUST00000122318 993 ntBASIC19.9■□□□□ 0.78
Trim27Q62158 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trim27Q62158 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim27Q62158 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Trim27Q62158 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim27Q62158 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim27Q62158 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Trim27Q62158 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim27Q62158 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim27Q62158 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC19.9■□□□□ 0.78
Trim27Q62158 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC19.9■□□□□ 0.78
Trim27Q62158 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim27Q62158 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC19.89■□□□□ 0.78
Trim27Q62158 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
Trim27Q62158 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Trim27Q62158 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
Trim27Q62158 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Trim27Q62158 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim27Q62158 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Trim27Q62158 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC19.89■□□□□ 0.77
Trim27Q62158 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC19.89■□□□□ 0.77
Trim27Q62158 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim27Q62158 Gm44729-201ENSMUST00000206759 2052 ntBASIC19.89■□□□□ 0.77
Trim27Q62158 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim27Q62158 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim27Q62158 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim27Q62158 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim27Q62158 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim27Q62158 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim27Q62158 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim27Q62158 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
Trim27Q62158 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Trim27Q62158 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim27Q62158 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Trim27Q62158 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Trim27Q62158 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim27Q62158 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim27Q62158 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim27Q62158 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
Trim27Q62158 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim27Q62158 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim27Q62158 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Trim27Q62158 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim27Q62158 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim27Q62158 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Trim27Q62158 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Trim27Q62158 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Trim27Q62158 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim27Q62158 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Trim27Q62158 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim27Q62158 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Trim27Q62158 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim27Q62158 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Trim27Q62158 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim27Q62158 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim27Q62158 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim27Q62158 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim27Q62158 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim27Q62158 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim27Q62158 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim27Q62158 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Trim27Q62158 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim27Q62158 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms