Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
VcanQ62059 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
VcanQ62059 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
VcanQ62059 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC15.13■□□□□ 0.01
VcanQ62059 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
VcanQ62059 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
VcanQ62059 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
VcanQ62059 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
VcanQ62059 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
VcanQ62059 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
VcanQ62059 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC15.13■□□□□ 0.01
VcanQ62059 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC15.13■□□□□ 0.01
VcanQ62059 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
VcanQ62059 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
VcanQ62059 Gm12892-201ENSMUST00000117367 1146 ntBASIC15.13■□□□□ 0.01
VcanQ62059 Gm13829-201ENSMUST00000119600 138 ntBASIC15.13■□□□□ 0.01
VcanQ62059 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
VcanQ62059 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
VcanQ62059 CT025626.1-201ENSMUST00000223735 1455 ntBASIC15.13■□□□□ 0.01
VcanQ62059 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
VcanQ62059 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC15.13■□□□□ 0.01
VcanQ62059 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
VcanQ62059 Slc35b2-202ENSMUST00000223987 1766 ntBASIC15.12■□□□□ 0.01
VcanQ62059 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
VcanQ62059 Gm6858-201ENSMUST00000208582 1468 ntBASIC15.12■□□□□ 0.01
VcanQ62059 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC15.12■□□□□ 0.01
VcanQ62059 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
VcanQ62059 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
VcanQ62059 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
VcanQ62059 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
VcanQ62059 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC15.12■□□□□ 0.01
VcanQ62059 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
VcanQ62059 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
VcanQ62059 Gm25406-201ENSMUST00000157599 105 ntBASIC15.12■□□□□ 0.01
VcanQ62059 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC15.12■□□□□ 0.01
VcanQ62059 AC147366.1-201ENSMUST00000227671 852 ntBASIC15.12■□□□□ 0.01
VcanQ62059 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC15.12■□□□□ 0.01
VcanQ62059 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
VcanQ62059 Wnt10b-206ENSMUST00000228546 2709 ntBASIC15.12■□□□□ 0.01
VcanQ62059 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
VcanQ62059 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
VcanQ62059 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
VcanQ62059 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
VcanQ62059 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
VcanQ62059 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
VcanQ62059 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC15.11■□□□□ 0.01
VcanQ62059 Gm11745-201ENSMUST00000121669 448 ntBASIC15.11■□□□□ 0.01
VcanQ62059 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
VcanQ62059 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VcanQ62059 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
VcanQ62059 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC15.11■□□□□ 0.01
VcanQ62059 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VcanQ62059 Gm15427-201ENSMUST00000117288 531 ntBASIC15.11■□□□□ 0.01
VcanQ62059 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC15.11■□□□□ 0.01
VcanQ62059 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC15.11■□□□□ 0.01
VcanQ62059 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
VcanQ62059 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
VcanQ62059 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
VcanQ62059 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VcanQ62059 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
VcanQ62059 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC15.11■□□□□ 0.01
VcanQ62059 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
VcanQ62059 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
VcanQ62059 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VcanQ62059 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VcanQ62059 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
VcanQ62059 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
VcanQ62059 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
VcanQ62059 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VcanQ62059 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC15.11■□□□□ 0.01
VcanQ62059 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VcanQ62059 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC15.1■□□□□ 0.01
VcanQ62059 Gm5177-201ENSMUST00000183092 997 ntBASIC15.1■□□□□ 0.01
VcanQ62059 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
VcanQ62059 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
VcanQ62059 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
VcanQ62059 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VcanQ62059 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VcanQ62059 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
VcanQ62059 Fcho2-208ENSMUST00000224992 2964 ntBASIC15.1■□□□□ 0.01
VcanQ62059 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
VcanQ62059 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
VcanQ62059 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC15.1■□□□□ 0.01
VcanQ62059 Gm44719-201ENSMUST00000206404 149 ntBASIC15.1■□□□□ 0.01
VcanQ62059 Gm5628-201ENSMUST00000222318 1049 ntBASIC15.1■□□□□ 0.01
VcanQ62059 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VcanQ62059 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
VcanQ62059 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VcanQ62059 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
VcanQ62059 AC140397.2-201ENSMUST00000224213 834 ntBASIC15.1■□□□□ 0.01
VcanQ62059 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VcanQ62059 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
VcanQ62059 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VcanQ62059 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
VcanQ62059 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
VcanQ62059 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
VcanQ62059 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
VcanQ62059 Gm38318-201ENSMUST00000195769 1706 ntBASIC15.09■□□□□ 0.01
VcanQ62059 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC15.09■□□□□ 0.01
VcanQ62059 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms