Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Notch3Q61982 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Notch3Q61982 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Notch3Q61982 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC12.44□□□□□ -0.42
Notch3Q61982 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Notch3Q61982 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Notch3Q61982 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Notch3Q61982 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Notch3Q61982 AC154621.1-201ENSMUST00000226155 1119 ntBASIC12.44□□□□□ -0.42
Notch3Q61982 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Notch3Q61982 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Notch3Q61982 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Notch3Q61982 Gm37519-201ENSMUST00000191687 2210 ntBASIC12.44□□□□□ -0.42
Notch3Q61982 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Notch3Q61982 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Notch3Q61982 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Notch3Q61982 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Notch3Q61982 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Notch3Q61982 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Notch3Q61982 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Notch3Q61982 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Notch3Q61982 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Notch3Q61982 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Notch3Q61982 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Notch3Q61982 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Notch3Q61982 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Notch3Q61982 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Notch3Q61982 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Notch3Q61982 Gm12644-201ENSMUST00000119935 606 ntBASIC12.44□□□□□ -0.42
Notch3Q61982 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Notch3Q61982 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Notch3Q61982 Gm7292-201ENSMUST00000194706 2527 ntBASIC12.44□□□□□ -0.42
Notch3Q61982 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
Notch3Q61982 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Notch3Q61982 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Notch3Q61982 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Notch3Q61982 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Notch3Q61982 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Notch3Q61982 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Notch3Q61982 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Notch3Q61982 Gm7935-201ENSMUST00000100555 1278 ntBASIC12.43□□□□□ -0.42
Notch3Q61982 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC12.43□□□□□ -0.42
Notch3Q61982 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Notch3Q61982 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Notch3Q61982 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Notch3Q61982 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Notch3Q61982 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Notch3Q61982 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Notch3Q61982 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Notch3Q61982 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Notch3Q61982 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Notch3Q61982 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Notch3Q61982 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Notch3Q61982 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Notch3Q61982 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Notch3Q61982 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Notch3Q61982 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Notch3Q61982 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC12.43□□□□□ -0.42
Notch3Q61982 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC12.43□□□□□ -0.42
Notch3Q61982 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Notch3Q61982 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Notch3Q61982 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Notch3Q61982 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Notch3Q61982 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Notch3Q61982 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Notch3Q61982 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Notch3Q61982 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Notch3Q61982 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Notch3Q61982 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Notch3Q61982 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC12.42□□□□□ -0.42
Notch3Q61982 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Notch3Q61982 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Notch3Q61982 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC12.42□□□□□ -0.42
Notch3Q61982 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Notch3Q61982 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Notch3Q61982 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Notch3Q61982 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Notch3Q61982 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Notch3Q61982 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC12.42□□□□□ -0.42
Notch3Q61982 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Notch3Q61982 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC12.42□□□□□ -0.42
Notch3Q61982 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC12.42□□□□□ -0.42
Notch3Q61982 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Notch3Q61982 Gm6376-201ENSMUST00000209407 580 ntBASIC12.42□□□□□ -0.42
Notch3Q61982 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC12.42□□□□□ -0.42
Notch3Q61982 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Notch3Q61982 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Notch3Q61982 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Notch3Q61982 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Notch3Q61982 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Notch3Q61982 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Notch3Q61982 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC12.42□□□□□ -0.42
Notch3Q61982 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Notch3Q61982 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Notch3Q61982 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Notch3Q61982 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Notch3Q61982 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Notch3Q61982 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC12.42□□□□□ -0.42
Notch3Q61982 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC12.42□□□□□ -0.42
Notch3Q61982 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms