Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Gli3Q61602 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Gli3Q61602 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Gli3Q61602 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC21.85■■□□□ 1.09
Gli3Q61602 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC21.85■■□□□ 1.09
Gli3Q61602 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC21.85■■□□□ 1.09
Gli3Q61602 Gm38319-201ENSMUST00000194537 1266 ntBASIC21.85■■□□□ 1.09
Gli3Q61602 Gm44719-201ENSMUST00000206404 149 ntBASIC21.85■■□□□ 1.09
Gli3Q61602 AC151836.1-202ENSMUST00000226259 753 ntBASIC21.85■■□□□ 1.09
Gli3Q61602 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC21.85■■□□□ 1.09
Gli3Q61602 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Gli3Q61602 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Gli3Q61602 Gm16198-201ENSMUST00000118766 670 ntBASIC21.84■■□□□ 1.09
Gli3Q61602 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC21.84■■□□□ 1.09
Gli3Q61602 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC21.84■■□□□ 1.09
Gli3Q61602 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Gli3Q61602 Gm17837-201ENSMUST00000186435 985 ntBASIC21.84■■□□□ 1.09
Gli3Q61602 Gm18057-201ENSMUST00000208220 503 ntBASIC21.84■■□□□ 1.09
Gli3Q61602 Gm18246-201ENSMUST00000221023 728 ntBASIC21.84■■□□□ 1.09
Gli3Q61602 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Gli3Q61602 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Gli3Q61602 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Gli3Q61602 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Gli3Q61602 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
Gli3Q61602 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Gli3Q61602 Gm16215-201ENSMUST00000161990 637 ntBASIC21.83■■□□□ 1.09
Gli3Q61602 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Gli3Q61602 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC21.83■■□□□ 1.09
Gli3Q61602 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
Gli3Q61602 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Gli3Q61602 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
Gli3Q61602 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Gli3Q61602 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.08
Gli3Q61602 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Gli3Q61602 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Gli3Q61602 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Gli3Q61602 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC21.82■■□□□ 1.08
Gli3Q61602 Mir6420-201ENSMUST00000185032 102 ntBASIC21.82■■□□□ 1.08
Gli3Q61602 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Gli3Q61602 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Gli3Q61602 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Gli3Q61602 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Gli3Q61602 Gm13453-201ENSMUST00000118708 357 ntBASIC21.82■■□□□ 1.08
Gli3Q61602 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC21.82■■□□□ 1.08
Gli3Q61602 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC21.82■■□□□ 1.08
Gli3Q61602 AC132863.2-201ENSMUST00000226643 799 ntBASIC21.82■■□□□ 1.08
Gli3Q61602 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Gli3Q61602 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
Gli3Q61602 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Gli3Q61602 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Gli3Q61602 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Gli3Q61602 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Gli3Q61602 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
Gli3Q61602 Gm6415-201ENSMUST00000118488 348 ntBASIC21.81■■□□□ 1.08
Gli3Q61602 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Gli3Q61602 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC21.81■■□□□ 1.08
Gli3Q61602 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC21.81■■□□□ 1.08
Gli3Q61602 AC166341.4-201ENSMUST00000220625 123 ntBASIC21.81■■□□□ 1.08
Gli3Q61602 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Gli3Q61602 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Gli3Q61602 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.81■■□□□ 1.08
Gli3Q61602 Grk6-206ENSMUST00000224995 2971 ntBASIC21.81■■□□□ 1.08
Gli3Q61602 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Gli3Q61602 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Gli3Q61602 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Gli3Q61602 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Gli3Q61602 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
Gli3Q61602 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Gli3Q61602 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Gli3Q61602 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Gli3Q61602 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Gli3Q61602 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Gli3Q61602 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC21.8■■□□□ 1.08
Gli3Q61602 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Gli3Q61602 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Gli3Q61602 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Gli3Q61602 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC21.8■■□□□ 1.08
Gli3Q61602 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Gli3Q61602 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Gli3Q61602 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Gli3Q61602 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC21.79■■□□□ 1.08
Gli3Q61602 Mir1938-201ENSMUST00000158746 100 ntBASIC21.79■■□□□ 1.08
Gli3Q61602 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC21.79■■□□□ 1.08
Gli3Q61602 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Gli3Q61602 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Gli3Q61602 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Gli3Q61602 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC21.79■■□□□ 1.08
Gli3Q61602 Syt7-205ENSMUST00000224135 1557 ntBASIC21.79■■□□□ 1.08
Gli3Q61602 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Gli3Q61602 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Gli3Q61602 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC21.78■■□□□ 1.08
Gli3Q61602 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Gli3Q61602 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC21.78■■□□□ 1.08
Gli3Q61602 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC21.78■■□□□ 1.08
Gli3Q61602 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Gli3Q61602 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Gli3Q61602 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Gli3Q61602 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Gli3Q61602 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Gli3Q61602 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms