Protein–RNA interactions for Protein: Q61457

Ccne1, G1/S-specific cyclin-E1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccne1Q61457 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ccne1Q61457 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccne1Q61457 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccne1Q61457 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Ccne1Q61457 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Ccne1Q61457 Gm4609-201ENSMUST00000106443 1002 ntBASIC21.01■□□□□ 0.95
Ccne1Q61457 Gm5138-201ENSMUST00000113842 1002 ntBASIC21.01■□□□□ 0.95
Ccne1Q61457 Gm15191-201ENSMUST00000117933 1000 ntBASIC21.01■□□□□ 0.95
Ccne1Q61457 Gm12182-201ENSMUST00000118655 1008 ntBASIC21.01■□□□□ 0.95
Ccne1Q61457 Gm13882-201ENSMUST00000120886 1002 ntBASIC21.01■□□□□ 0.95
Ccne1Q61457 Gm10284-201ENSMUST00000145057 1005 ntBASIC21.01■□□□□ 0.95
Ccne1Q61457 Gm10481-201ENSMUST00000179228 1002 ntBASIC21.01■□□□□ 0.95
Ccne1Q61457 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC21.01■□□□□ 0.95
Ccne1Q61457 Gm2574-201ENSMUST00000181051 1002 ntBASIC21.01■□□□□ 0.95
Ccne1Q61457 Gm3200-201ENSMUST00000181493 1002 ntBASIC21.01■□□□□ 0.95
Ccne1Q61457 Gm8825-201ENSMUST00000182565 998 ntBASIC21.01■□□□□ 0.95
Ccne1Q61457 Gm4518-201ENSMUST00000182638 718 ntBASIC21.01■□□□□ 0.95
Ccne1Q61457 Gm8330-201ENSMUST00000182754 1008 ntBASIC21.01■□□□□ 0.95
Ccne1Q61457 Gm4575-201ENSMUST00000182991 1002 ntBASIC21.01■□□□□ 0.95
Ccne1Q61457 Gm8709-201ENSMUST00000183230 1012 ntBASIC21.01■□□□□ 0.95
Ccne1Q61457 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Ccne1Q61457 AC117588.1-201ENSMUST00000228510 999 ntBASIC21.01■□□□□ 0.95
Ccne1Q61457 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccne1Q61457 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccne1Q61457 Gm10293-201ENSMUST00000076317 1002 ntBASIC21.01■□□□□ 0.95
Ccne1Q61457 Gm6316-201ENSMUST00000082064 1020 ntBASIC21.01■□□□□ 0.95
Ccne1Q61457 Gm8784-201ENSMUST00000222096 1435 ntBASIC21.01■□□□□ 0.95
Ccne1Q61457 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccne1Q61457 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC21.01■□□□□ 0.95
Ccne1Q61457 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Ccne1Q61457 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ccne1Q61457 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Ccne1Q61457 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC21■□□□□ 0.95
Ccne1Q61457 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ccne1Q61457 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Ccne1Q61457 Gm23935-201ENSMUST00000102303 57 ntBASIC21■□□□□ 0.95
Ccne1Q61457 Gm24270-201ENSMUST00000102326 57 ntBASIC21■□□□□ 0.95
Ccne1Q61457 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC21■□□□□ 0.95
Ccne1Q61457 Gm24245-201ENSMUST00000157318 57 ntBASIC21■□□□□ 0.95
Ccne1Q61457 Gm6736-201ENSMUST00000166583 948 ntBASIC21■□□□□ 0.95
Ccne1Q61457 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC21■□□□□ 0.95
Ccne1Q61457 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC21■□□□□ 0.95
Ccne1Q61457 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC21■□□□□ 0.95
Ccne1Q61457 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC21■□□□□ 0.95
Ccne1Q61457 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ccne1Q61457 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ccne1Q61457 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Ccne1Q61457 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC21■□□□□ 0.95
Ccne1Q61457 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC21■□□□□ 0.95
Ccne1Q61457 Gm42900-201ENSMUST00000197184 2167 ntBASIC21■□□□□ 0.95
Ccne1Q61457 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ccne1Q61457 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC21■□□□□ 0.95
Ccne1Q61457 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ccne1Q61457 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC21■□□□□ 0.95
Ccne1Q61457 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC20.99■□□□□ 0.95
Ccne1Q61457 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC20.99■□□□□ 0.95
Ccne1Q61457 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccne1Q61457 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccne1Q61457 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccne1Q61457 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ccne1Q61457 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccne1Q61457 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccne1Q61457 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccne1Q61457 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccne1Q61457 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccne1Q61457 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccne1Q61457 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccne1Q61457 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccne1Q61457 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccne1Q61457 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ccne1Q61457 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ccne1Q61457 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccne1Q61457 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccne1Q61457 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccne1Q61457 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Ccne1Q61457 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC20.98■□□□□ 0.95
Ccne1Q61457 AC225888.1-201ENSMUST00000227184 728 ntBASIC20.98■□□□□ 0.95
Ccne1Q61457 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC20.98■□□□□ 0.95
Ccne1Q61457 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccne1Q61457 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccne1Q61457 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccne1Q61457 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ccne1Q61457 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Ccne1Q61457 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccne1Q61457 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccne1Q61457 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccne1Q61457 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccne1Q61457 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccne1Q61457 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccne1Q61457 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ccne1Q61457 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC20.97■□□□□ 0.95
Ccne1Q61457 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Ccne1Q61457 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC20.97■□□□□ 0.95
Ccne1Q61457 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccne1Q61457 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccne1Q61457 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC20.97■□□□□ 0.95
Ccne1Q61457 Gm25911-201ENSMUST00000157621 56 ntBASIC20.97■□□□□ 0.95
Ccne1Q61457 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC20.97■□□□□ 0.95
Ccne1Q61457 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC20.97■□□□□ 0.95
Ccne1Q61457 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC20.97■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms