Protein–RNA interactions for Protein: Q61189

Clns1a, Methylosome subunit pICln, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clns1aQ61189 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Clns1aQ61189 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clns1aQ61189 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clns1aQ61189 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Clns1aQ61189 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clns1aQ61189 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clns1aQ61189 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clns1aQ61189 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
Clns1aQ61189 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Clns1aQ61189 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clns1aQ61189 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC13.92□□□□□ -0.18
Clns1aQ61189 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Clns1aQ61189 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clns1aQ61189 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clns1aQ61189 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clns1aQ61189 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clns1aQ61189 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clns1aQ61189 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clns1aQ61189 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clns1aQ61189 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clns1aQ61189 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clns1aQ61189 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Clns1aQ61189 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clns1aQ61189 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clns1aQ61189 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clns1aQ61189 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clns1aQ61189 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clns1aQ61189 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Clns1aQ61189 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clns1aQ61189 Gm17661-201ENSMUST00000170317 270 ntBASIC13.91□□□□□ -0.18
Clns1aQ61189 Gm10517-202ENSMUST00000192970 758 ntBASIC13.91□□□□□ -0.18
Clns1aQ61189 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clns1aQ61189 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clns1aQ61189 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Clns1aQ61189 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
Clns1aQ61189 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Clns1aQ61189 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC13.91□□□□□ -0.18
Clns1aQ61189 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clns1aQ61189 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC13.91□□□□□ -0.18
Clns1aQ61189 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Clns1aQ61189 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clns1aQ61189 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC13.91□□□□□ -0.18
Clns1aQ61189 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC13.9□□□□□ -0.18
Clns1aQ61189 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Clns1aQ61189 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clns1aQ61189 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clns1aQ61189 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC13.9□□□□□ -0.18
Clns1aQ61189 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clns1aQ61189 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clns1aQ61189 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
Clns1aQ61189 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clns1aQ61189 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clns1aQ61189 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC13.9□□□□□ -0.18
Clns1aQ61189 Gm9694-201ENSMUST00000193347 1189 ntBASIC13.9□□□□□ -0.18
Clns1aQ61189 Gm37025-201ENSMUST00000195159 829 ntBASIC13.9□□□□□ -0.18
Clns1aQ61189 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC13.9□□□□□ -0.18
Clns1aQ61189 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clns1aQ61189 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clns1aQ61189 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Clns1aQ61189 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC13.9□□□□□ -0.18
Clns1aQ61189 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Clns1aQ61189 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13.9□□□□□ -0.18
Clns1aQ61189 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clns1aQ61189 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clns1aQ61189 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clns1aQ61189 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clns1aQ61189 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Clns1aQ61189 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clns1aQ61189 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
Clns1aQ61189 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clns1aQ61189 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Clns1aQ61189 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clns1aQ61189 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clns1aQ61189 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Clns1aQ61189 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clns1aQ61189 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC13.89□□□□□ -0.19
Clns1aQ61189 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC13.89□□□□□ -0.19
Clns1aQ61189 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clns1aQ61189 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Clns1aQ61189 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Clns1aQ61189 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Clns1aQ61189 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clns1aQ61189 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC13.89□□□□□ -0.19
Clns1aQ61189 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC13.89□□□□□ -0.19
Clns1aQ61189 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC13.89□□□□□ -0.19
Clns1aQ61189 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clns1aQ61189 Mir5133-201ENSMUST00000174955 77 ntBASIC13.89□□□□□ -0.19
Clns1aQ61189 Gm42569-201ENSMUST00000200539 472 ntBASIC13.89□□□□□ -0.19
Clns1aQ61189 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clns1aQ61189 Gm18025-201ENSMUST00000221733 862 ntBASIC13.89□□□□□ -0.19
Clns1aQ61189 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Clns1aQ61189 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clns1aQ61189 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clns1aQ61189 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Clns1aQ61189 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC13.89□□□□□ -0.19
Clns1aQ61189 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Clns1aQ61189 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clns1aQ61189 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Clns1aQ61189 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
Clns1aQ61189 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms