Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sdf4Q61112 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sdf4Q61112 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sdf4Q61112 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sdf4Q61112 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.45■□□□□ 0.22
Sdf4Q61112 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sdf4Q61112 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sdf4Q61112 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sdf4Q61112 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Sdf4Q61112 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC16.45■□□□□ 0.22
Sdf4Q61112 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sdf4Q61112 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sdf4Q61112 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sdf4Q61112 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sdf4Q61112 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sdf4Q61112 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sdf4Q61112 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Sdf4Q61112 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sdf4Q61112 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sdf4Q61112 Gm14464-201ENSMUST00000119658 1254 ntBASIC16.44■□□□□ 0.22
Sdf4Q61112 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sdf4Q61112 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sdf4Q61112 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sdf4Q61112 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sdf4Q61112 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sdf4Q61112 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sdf4Q61112 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sdf4Q61112 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Sdf4Q61112 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Sdf4Q61112 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sdf4Q61112 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Sdf4Q61112 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.44■□□□□ 0.22
Sdf4Q61112 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sdf4Q61112 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sdf4Q61112 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sdf4Q61112 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Sdf4Q61112 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sdf4Q61112 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
Sdf4Q61112 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sdf4Q61112 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Sdf4Q61112 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sdf4Q61112 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC16.43■□□□□ 0.22
Sdf4Q61112 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.43■□□□□ 0.22
Sdf4Q61112 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sdf4Q61112 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sdf4Q61112 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Sdf4Q61112 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Sdf4Q61112 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Sdf4Q61112 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Sdf4Q61112 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC16.43■□□□□ 0.22
Sdf4Q61112 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sdf4Q61112 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Sdf4Q61112 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Sdf4Q61112 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sdf4Q61112 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sdf4Q61112 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Sdf4Q61112 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sdf4Q61112 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Sdf4Q61112 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.43■□□□□ 0.22
Sdf4Q61112 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sdf4Q61112 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sdf4Q61112 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sdf4Q61112 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sdf4Q61112 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sdf4Q61112 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sdf4Q61112 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Sdf4Q61112 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Sdf4Q61112 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sdf4Q61112 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sdf4Q61112 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC16.42■□□□□ 0.22
Sdf4Q61112 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Sdf4Q61112 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
Sdf4Q61112 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sdf4Q61112 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Sdf4Q61112 Ighv6-1-201ENSMUST00000193612 343 ntBASIC16.42■□□□□ 0.22
Sdf4Q61112 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sdf4Q61112 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sdf4Q61112 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sdf4Q61112 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sdf4Q61112 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Sdf4Q61112 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Sdf4Q61112 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sdf4Q61112 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sdf4Q61112 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sdf4Q61112 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sdf4Q61112 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Sdf4Q61112 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC16.41■□□□□ 0.22
Sdf4Q61112 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC16.41■□□□□ 0.22
Sdf4Q61112 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Sdf4Q61112 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Sdf4Q61112 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sdf4Q61112 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Sdf4Q61112 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sdf4Q61112 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sdf4Q61112 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sdf4Q61112 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.41■□□□□ 0.22
Sdf4Q61112 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Sdf4Q61112 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sdf4Q61112 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Sdf4Q61112 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms