Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC15.92■□□□□ 0.14
Col12a1Q60847 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col12a1Q60847 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col12a1Q60847 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Col12a1Q60847 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Col12a1Q60847 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col12a1Q60847 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col12a1Q60847 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
Col12a1Q60847 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Col12a1Q60847 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col12a1Q60847 Gm7336-201ENSMUST00000107041 1232 ntBASIC15.92■□□□□ 0.14
Col12a1Q60847 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC15.92■□□□□ 0.14
Col12a1Q60847 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
Col12a1Q60847 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col12a1Q60847 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Col12a1Q60847 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC15.92■□□□□ 0.14
Col12a1Q60847 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC15.92■□□□□ 0.14
Col12a1Q60847 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Col12a1Q60847 Cdk7-205ENSMUST00000225990 1159 ntBASIC15.92■□□□□ 0.14
Col12a1Q60847 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Col12a1Q60847 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Col12a1Q60847 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col12a1Q60847 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC15.91■□□□□ 0.14
Col12a1Q60847 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col12a1Q60847 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC15.91■□□□□ 0.14
Col12a1Q60847 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col12a1Q60847 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Col12a1Q60847 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col12a1Q60847 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col12a1Q60847 Gm37519-201ENSMUST00000191687 2210 ntBASIC15.91■□□□□ 0.14
Col12a1Q60847 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Col12a1Q60847 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Col12a1Q60847 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col12a1Q60847 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col12a1Q60847 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col12a1Q60847 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col12a1Q60847 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Col12a1Q60847 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col12a1Q60847 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC15.9■□□□□ 0.14
Col12a1Q60847 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col12a1Q60847 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col12a1Q60847 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC15.9■□□□□ 0.14
Col12a1Q60847 Thap2-203ENSMUST00000218989 527 ntBASIC15.9■□□□□ 0.14
Col12a1Q60847 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col12a1Q60847 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col12a1Q60847 Gm22065-201ENSMUST00000103753 110 ntBASIC15.9■□□□□ 0.14
Col12a1Q60847 Gm22066-201ENSMUST00000103761 110 ntBASIC15.9■□□□□ 0.14
Col12a1Q60847 Gm24932-201ENSMUST00000103763 110 ntBASIC15.9■□□□□ 0.14
Col12a1Q60847 Gm24115-201ENSMUST00000103799 110 ntBASIC15.9■□□□□ 0.14
Col12a1Q60847 Gm22190-201ENSMUST00000103827 110 ntBASIC15.9■□□□□ 0.14
Col12a1Q60847 Gm22191-201ENSMUST00000103831 110 ntBASIC15.9■□□□□ 0.14
Col12a1Q60847 Gm24721-201ENSMUST00000103849 110 ntBASIC15.9■□□□□ 0.14
Col12a1Q60847 Gm28018-201ENSMUST00000103869 110 ntBASIC15.9■□□□□ 0.14
Col12a1Q60847 Gm26399-201ENSMUST00000103937 110 ntBASIC15.9■□□□□ 0.14
Col12a1Q60847 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC15.9■□□□□ 0.14
Col12a1Q60847 Gm25349-201ENSMUST00000177728 110 ntBASIC15.9■□□□□ 0.14
Col12a1Q60847 Gm23616-201ENSMUST00000177797 110 ntBASIC15.9■□□□□ 0.14
Col12a1Q60847 Gm25871-201ENSMUST00000177816 110 ntBASIC15.9■□□□□ 0.14
Col12a1Q60847 Gm24752-201ENSMUST00000178240 110 ntBASIC15.9■□□□□ 0.14
Col12a1Q60847 Gm24496-201ENSMUST00000178287 110 ntBASIC15.9■□□□□ 0.14
Col12a1Q60847 Gm25649-201ENSMUST00000178476 110 ntBASIC15.9■□□□□ 0.14
Col12a1Q60847 Gm25548-201ENSMUST00000178681 110 ntBASIC15.9■□□□□ 0.14
Col12a1Q60847 Gm23147-201ENSMUST00000178841 110 ntBASIC15.9■□□□□ 0.14
Col12a1Q60847 Gm26095-201ENSMUST00000179270 110 ntBASIC15.9■□□□□ 0.14
Col12a1Q60847 Gm22171-201ENSMUST00000179283 110 ntBASIC15.9■□□□□ 0.14
Col12a1Q60847 Gm23936-201ENSMUST00000179354 110 ntBASIC15.9■□□□□ 0.14
Col12a1Q60847 Gm22619-201ENSMUST00000179516 110 ntBASIC15.9■□□□□ 0.14
Col12a1Q60847 Gm25255-201ENSMUST00000179579 110 ntBASIC15.9■□□□□ 0.14
Col12a1Q60847 Gm24755-201ENSMUST00000179691 110 ntBASIC15.9■□□□□ 0.14
Col12a1Q60847 Gm26506-201ENSMUST00000179692 110 ntBASIC15.9■□□□□ 0.14
Col12a1Q60847 Gm25086-201ENSMUST00000179931 110 ntBASIC15.9■□□□□ 0.14
Col12a1Q60847 Gm23243-201ENSMUST00000180047 110 ntBASIC15.9■□□□□ 0.14
Col12a1Q60847 Gm24659-201ENSMUST00000180212 110 ntBASIC15.9■□□□□ 0.14
Col12a1Q60847 Gm24169-201ENSMUST00000180244 110 ntBASIC15.9■□□□□ 0.14
Col12a1Q60847 Gm23689-201ENSMUST00000180354 110 ntBASIC15.9■□□□□ 0.14
Col12a1Q60847 Gm27359-201ENSMUST00000184153 110 ntBASIC15.9■□□□□ 0.14
Col12a1Q60847 Gm27785-201ENSMUST00000184268 110 ntBASIC15.9■□□□□ 0.14
Col12a1Q60847 Gm27466-201ENSMUST00000184396 110 ntBASIC15.9■□□□□ 0.14
Col12a1Q60847 Gm27703-201ENSMUST00000184836 110 ntBASIC15.9■□□□□ 0.14
Col12a1Q60847 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC15.9■□□□□ 0.14
Col12a1Q60847 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Col12a1Q60847 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
Col12a1Q60847 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col12a1Q60847 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Col12a1Q60847 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Col12a1Q60847 Gm5828-201ENSMUST00000071842 1860 ntBASIC15.89■□□□□ 0.13
Col12a1Q60847 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col12a1Q60847 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Col12a1Q60847 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col12a1Q60847 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC15.89■□□□□ 0.13
Col12a1Q60847 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Col12a1Q60847 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Col12a1Q60847 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Col12a1Q60847 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col12a1Q60847 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col12a1Q60847 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col12a1Q60847 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col12a1Q60847 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Col12a1Q60847 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
Col12a1Q60847 AC159621.2-201ENSMUST00000223519 1326 ntBASIC15.88■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms