Protein–RNA interactions for Protein: Q60636

Prdm1, PR domain zinc finger protein 1, mousemouse

Predictions only

Length 856 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm1Q60636 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Prdm1Q60636 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC18.93■□□□□ 0.62
Prdm1Q60636 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Prdm1Q60636 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Prdm1Q60636 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
Prdm1Q60636 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Prdm1Q60636 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Prdm1Q60636 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Prdm1Q60636 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
Prdm1Q60636 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Prdm1Q60636 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Prdm1Q60636 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Prdm1Q60636 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Prdm1Q60636 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Prdm1Q60636 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Prdm1Q60636 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC18.92■□□□□ 0.62
Prdm1Q60636 Gm9103-201ENSMUST00000119371 405 ntBASIC18.92■□□□□ 0.62
Prdm1Q60636 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Prdm1Q60636 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Prdm1Q60636 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Prdm1Q60636 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC18.92■□□□□ 0.62
Prdm1Q60636 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Prdm1Q60636 Gm28265-201ENSMUST00000188201 2319 ntBASIC18.92■□□□□ 0.62
Prdm1Q60636 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Prdm1Q60636 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Prdm1Q60636 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC18.92■□□□□ 0.62
Prdm1Q60636 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Prdm1Q60636 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Prdm1Q60636 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Prdm1Q60636 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Prdm1Q60636 AC115863.1-201ENSMUST00000214815 1813 ntBASIC18.91■□□□□ 0.62
Prdm1Q60636 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Prdm1Q60636 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Prdm1Q60636 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC18.91■□□□□ 0.62
Prdm1Q60636 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC18.91■□□□□ 0.62
Prdm1Q60636 Gm28033-201ENSMUST00000184224 96 ntBASIC18.91■□□□□ 0.62
Prdm1Q60636 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Prdm1Q60636 AC124569.2-201ENSMUST00000225998 818 ntBASIC18.91■□□□□ 0.62
Prdm1Q60636 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Prdm1Q60636 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Prdm1Q60636 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC18.91■□□□□ 0.62
Prdm1Q60636 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Prdm1Q60636 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Prdm1Q60636 Gm32996-201ENSMUST00000199828 1447 ntBASIC18.91■□□□□ 0.62
Prdm1Q60636 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Prdm1Q60636 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
Prdm1Q60636 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Prdm1Q60636 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Prdm1Q60636 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Prdm1Q60636 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Prdm1Q60636 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Prdm1Q60636 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC18.9■□□□□ 0.62
Prdm1Q60636 Gm13312-201ENSMUST00000119631 718 ntBASIC18.9■□□□□ 0.62
Prdm1Q60636 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Prdm1Q60636 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Prdm1Q60636 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC18.9■□□□□ 0.62
Prdm1Q60636 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Prdm1Q60636 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Prdm1Q60636 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Prdm1Q60636 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Prdm1Q60636 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Prdm1Q60636 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Prdm1Q60636 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
Prdm1Q60636 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Prdm1Q60636 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Prdm1Q60636 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Prdm1Q60636 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC18.9■□□□□ 0.62
Prdm1Q60636 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Prdm1Q60636 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Prdm1Q60636 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Prdm1Q60636 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Prdm1Q60636 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Prdm1Q60636 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC18.89■□□□□ 0.62
Prdm1Q60636 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Prdm1Q60636 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Prdm1Q60636 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
Prdm1Q60636 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
Prdm1Q60636 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Prdm1Q60636 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
Prdm1Q60636 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Prdm1Q60636 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC18.89■□□□□ 0.61
Prdm1Q60636 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Prdm1Q60636 Gm18669-201ENSMUST00000216049 778 ntBASIC18.89■□□□□ 0.61
Prdm1Q60636 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Prdm1Q60636 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Prdm1Q60636 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Prdm1Q60636 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Prdm1Q60636 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Prdm1Q60636 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Prdm1Q60636 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC18.89■□□□□ 0.61
Prdm1Q60636 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Prdm1Q60636 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Prdm1Q60636 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC18.89■□□□□ 0.61
Prdm1Q60636 Gm6858-201ENSMUST00000208582 1468 ntBASIC18.89■□□□□ 0.61
Prdm1Q60636 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Prdm1Q60636 Gm37166-201ENSMUST00000195473 2474 ntBASIC18.89■□□□□ 0.61
Prdm1Q60636 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Prdm1Q60636 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Prdm1Q60636 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Prdm1Q60636 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms