Protein–RNA interactions for Protein: Q5SUQ9

Ctc1, CST complex subunit CTC1, mousemouse

Predictions only

Length 1,212 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctc1Q5SUQ9 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ctc1Q5SUQ9 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ctc1Q5SUQ9 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ctc1Q5SUQ9 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ctc1Q5SUQ9 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ctc1Q5SUQ9 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC17.15■□□□□ 0.34
Ctc1Q5SUQ9 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC17.15■□□□□ 0.34
Ctc1Q5SUQ9 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ctc1Q5SUQ9 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ctc1Q5SUQ9 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ctc1Q5SUQ9 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC17.15■□□□□ 0.34
Ctc1Q5SUQ9 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Ctc1Q5SUQ9 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ctc1Q5SUQ9 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ctc1Q5SUQ9 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ctc1Q5SUQ9 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Ctc1Q5SUQ9 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Ctc1Q5SUQ9 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ctc1Q5SUQ9 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ctc1Q5SUQ9 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ctc1Q5SUQ9 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ctc1Q5SUQ9 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ctc1Q5SUQ9 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ctc1Q5SUQ9 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ctc1Q5SUQ9 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ctc1Q5SUQ9 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC17.14■□□□□ 0.33
Ctc1Q5SUQ9 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Ctc1Q5SUQ9 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ctc1Q5SUQ9 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ctc1Q5SUQ9 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ctc1Q5SUQ9 Birc2-201ENSMUST00000054878 378 ntBASIC17.14■□□□□ 0.33
Ctc1Q5SUQ9 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ctc1Q5SUQ9 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ctc1Q5SUQ9 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ctc1Q5SUQ9 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ctc1Q5SUQ9 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ctc1Q5SUQ9 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ctc1Q5SUQ9 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ctc1Q5SUQ9 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ctc1Q5SUQ9 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ctc1Q5SUQ9 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ctc1Q5SUQ9 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ctc1Q5SUQ9 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC17.13■□□□□ 0.33
Ctc1Q5SUQ9 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC17.13■□□□□ 0.33
Ctc1Q5SUQ9 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Ctc1Q5SUQ9 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.13■□□□□ 0.33
Ctc1Q5SUQ9 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ctc1Q5SUQ9 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ctc1Q5SUQ9 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ctc1Q5SUQ9 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Ctc1Q5SUQ9 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ctc1Q5SUQ9 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Ctc1Q5SUQ9 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ctc1Q5SUQ9 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ctc1Q5SUQ9 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC17.13■□□□□ 0.33
Ctc1Q5SUQ9 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.13■□□□□ 0.33
Ctc1Q5SUQ9 Gm34391-201ENSMUST00000203706 907 ntBASIC17.13■□□□□ 0.33
Ctc1Q5SUQ9 AC164629.2-201ENSMUST00000217916 270 ntBASIC17.13■□□□□ 0.33
Ctc1Q5SUQ9 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ctc1Q5SUQ9 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ctc1Q5SUQ9 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ctc1Q5SUQ9 AC093043.3-201ENSMUST00000226531 2273 ntBASIC17.13■□□□□ 0.33
Ctc1Q5SUQ9 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
Ctc1Q5SUQ9 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Ctc1Q5SUQ9 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ctc1Q5SUQ9 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ctc1Q5SUQ9 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
Ctc1Q5SUQ9 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC17.12■□□□□ 0.33
Ctc1Q5SUQ9 Olfr129-201ENSMUST00000122318 993 ntBASIC17.12■□□□□ 0.33
Ctc1Q5SUQ9 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.12■□□□□ 0.33
Ctc1Q5SUQ9 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ctc1Q5SUQ9 Gm28659-201ENSMUST00000188013 759 ntBASIC17.12■□□□□ 0.33
Ctc1Q5SUQ9 Gm43514-201ENSMUST00000198852 424 ntBASIC17.12■□□□□ 0.33
Ctc1Q5SUQ9 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.12■□□□□ 0.33
Ctc1Q5SUQ9 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ctc1Q5SUQ9 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ctc1Q5SUQ9 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ctc1Q5SUQ9 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Ctc1Q5SUQ9 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
Ctc1Q5SUQ9 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ctc1Q5SUQ9 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ctc1Q5SUQ9 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ctc1Q5SUQ9 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ctc1Q5SUQ9 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ctc1Q5SUQ9 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC17.11■□□□□ 0.33
Ctc1Q5SUQ9 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ctc1Q5SUQ9 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ctc1Q5SUQ9 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ctc1Q5SUQ9 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC17.11■□□□□ 0.33
Ctc1Q5SUQ9 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ctc1Q5SUQ9 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ctc1Q5SUQ9 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Ctc1Q5SUQ9 Gm11336-201ENSMUST00000118168 334 ntBASIC17.11■□□□□ 0.33
Ctc1Q5SUQ9 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Ctc1Q5SUQ9 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ctc1Q5SUQ9 Gm36967-201ENSMUST00000193814 266 ntBASIC17.11■□□□□ 0.33
Ctc1Q5SUQ9 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ctc1Q5SUQ9 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.11■□□□□ 0.33
Ctc1Q5SUQ9 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ctc1Q5SUQ9 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms