Protein–RNA interactions for Protein: Q5KU39

Vps41, Vacuolar protein sorting-associated protein 41 homolog, mousemouse

Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps41Q5KU39 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC16.94■□□□□ 0.3
Vps41Q5KU39 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vps41Q5KU39 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vps41Q5KU39 Timm23-208ENSMUST00000226683 750 ntBASIC16.94■□□□□ 0.3
Vps41Q5KU39 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vps41Q5KU39 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Vps41Q5KU39 Gm16011-201ENSMUST00000121567 2662 ntBASIC16.94■□□□□ 0.3
Vps41Q5KU39 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vps41Q5KU39 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vps41Q5KU39 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vps41Q5KU39 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Vps41Q5KU39 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vps41Q5KU39 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vps41Q5KU39 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vps41Q5KU39 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Vps41Q5KU39 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Vps41Q5KU39 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vps41Q5KU39 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vps41Q5KU39 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vps41Q5KU39 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vps41Q5KU39 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
Vps41Q5KU39 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
Vps41Q5KU39 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vps41Q5KU39 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vps41Q5KU39 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Vps41Q5KU39 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC16.93■□□□□ 0.3
Vps41Q5KU39 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC16.93■□□□□ 0.3
Vps41Q5KU39 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Vps41Q5KU39 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vps41Q5KU39 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vps41Q5KU39 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vps41Q5KU39 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vps41Q5KU39 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vps41Q5KU39 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vps41Q5KU39 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vps41Q5KU39 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vps41Q5KU39 AC154855.1-201ENSMUST00000227353 1458 ntBASIC16.93■□□□□ 0.3
Vps41Q5KU39 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps41Q5KU39 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps41Q5KU39 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps41Q5KU39 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps41Q5KU39 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps41Q5KU39 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps41Q5KU39 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Vps41Q5KU39 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC16.92■□□□□ 0.3
Vps41Q5KU39 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps41Q5KU39 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Vps41Q5KU39 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Vps41Q5KU39 AC153881.1-201ENSMUST00000214448 284 ntBASIC16.92■□□□□ 0.3
Vps41Q5KU39 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC16.92■□□□□ 0.3
Vps41Q5KU39 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC16.92■□□□□ 0.3
Vps41Q5KU39 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Vps41Q5KU39 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps41Q5KU39 Prob1-201ENSMUST00000097619 3021 ntBASIC16.92■□□□□ 0.3
Vps41Q5KU39 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps41Q5KU39 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps41Q5KU39 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps41Q5KU39 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps41Q5KU39 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Vps41Q5KU39 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps41Q5KU39 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Vps41Q5KU39 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps41Q5KU39 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps41Q5KU39 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps41Q5KU39 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Vps41Q5KU39 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps41Q5KU39 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps41Q5KU39 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Vps41Q5KU39 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Vps41Q5KU39 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC16.91■□□□□ 0.3
Vps41Q5KU39 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Vps41Q5KU39 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Vps41Q5KU39 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Vps41Q5KU39 AC156016.1-201ENSMUST00000227190 1035 ntBASIC16.91■□□□□ 0.3
Vps41Q5KU39 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps41Q5KU39 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps41Q5KU39 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps41Q5KU39 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC16.91■□□□□ 0.3
Vps41Q5KU39 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Vps41Q5KU39 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps41Q5KU39 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.91■□□□□ 0.3
Vps41Q5KU39 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps41Q5KU39 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps41Q5KU39 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps41Q5KU39 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps41Q5KU39 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.91■□□□□ 0.3
Vps41Q5KU39 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vps41Q5KU39 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vps41Q5KU39 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vps41Q5KU39 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vps41Q5KU39 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC16.9■□□□□ 0.3
Vps41Q5KU39 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vps41Q5KU39 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Vps41Q5KU39 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vps41Q5KU39 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vps41Q5KU39 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Vps41Q5KU39 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC16.9■□□□□ 0.3
Vps41Q5KU39 Gm13168-201ENSMUST00000121771 632 ntBASIC16.9■□□□□ 0.3
Vps41Q5KU39 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vps41Q5KU39 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms