Protein–RNA interactions for Protein: Q4U2R1

Herc2, E3 ubiquitin-protein ligase HERC2, mousemouse

Predictions only

Length 4,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc2Q4U2R1 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Herc2Q4U2R1 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Herc2Q4U2R1 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Herc2Q4U2R1 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Herc2Q4U2R1 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC9.59□□□□□ -0.88
Herc2Q4U2R1 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Herc2Q4U2R1 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Herc2Q4U2R1 Gm28630-201ENSMUST00000187806 498 ntBASIC9.58□□□□□ -0.88
Herc2Q4U2R1 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Herc2Q4U2R1 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Herc2Q4U2R1 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC9.58□□□□□ -0.88
Herc2Q4U2R1 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
Herc2Q4U2R1 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Herc2Q4U2R1 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Herc2Q4U2R1 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Herc2Q4U2R1 Gm15824-201ENSMUST00000119516 955 ntBASIC9.58□□□□□ -0.88
Herc2Q4U2R1 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Herc2Q4U2R1 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Herc2Q4U2R1 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Herc2Q4U2R1 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Herc2Q4U2R1 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Herc2Q4U2R1 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Herc2Q4U2R1 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Herc2Q4U2R1 Gm45841-201ENSMUST00000207700 164 ntBASIC9.58□□□□□ -0.88
Herc2Q4U2R1 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Herc2Q4U2R1 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Herc2Q4U2R1 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Herc2Q4U2R1 Gm29361-201ENSMUST00000183323 2000 ntBASIC9.58□□□□□ -0.88
Herc2Q4U2R1 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC9.58□□□□□ -0.88
Herc2Q4U2R1 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Herc2Q4U2R1 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Herc2Q4U2R1 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Herc2Q4U2R1 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Herc2Q4U2R1 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Herc2Q4U2R1 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Herc2Q4U2R1 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Herc2Q4U2R1 Gm13392-201ENSMUST00000117708 150 ntBASIC9.57□□□□□ -0.88
Herc2Q4U2R1 Gm6415-201ENSMUST00000118488 348 ntBASIC9.57□□□□□ -0.88
Herc2Q4U2R1 Gm13015-201ENSMUST00000118674 204 ntBASIC9.57□□□□□ -0.88
Herc2Q4U2R1 Gm2810-201ENSMUST00000118681 990 ntBASIC9.57□□□□□ -0.88
Herc2Q4U2R1 Gm15806-201ENSMUST00000120696 955 ntBASIC9.57□□□□□ -0.88
Herc2Q4U2R1 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Herc2Q4U2R1 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC9.57□□□□□ -0.88
Herc2Q4U2R1 AC166341.4-201ENSMUST00000220625 123 ntBASIC9.57□□□□□ -0.88
Herc2Q4U2R1 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Herc2Q4U2R1 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Herc2Q4U2R1 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC9.57□□□□□ -0.88
Herc2Q4U2R1 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Herc2Q4U2R1 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Herc2Q4U2R1 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC9.57□□□□□ -0.88
Herc2Q4U2R1 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC9.57□□□□□ -0.88
Herc2Q4U2R1 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Herc2Q4U2R1 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Herc2Q4U2R1 Gm9200-201ENSMUST00000118513 1354 ntBASIC9.57□□□□□ -0.88
Herc2Q4U2R1 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Herc2Q4U2R1 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Herc2Q4U2R1 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Herc2Q4U2R1 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Herc2Q4U2R1 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Herc2Q4U2R1 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC9.57□□□□□ -0.88
Herc2Q4U2R1 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC9.57□□□□□ -0.88
Herc2Q4U2R1 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Herc2Q4U2R1 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Herc2Q4U2R1 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Herc2Q4U2R1 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Herc2Q4U2R1 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Herc2Q4U2R1 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Herc2Q4U2R1 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Herc2Q4U2R1 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Herc2Q4U2R1 Gm14042-201ENSMUST00000120139 833 ntBASIC9.57□□□□□ -0.88
Herc2Q4U2R1 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC9.57□□□□□ -0.88
Herc2Q4U2R1 Gm27533-201ENSMUST00000183800 152 ntBASIC9.57□□□□□ -0.88
Herc2Q4U2R1 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Herc2Q4U2R1 Hsf1-204ENSMUST00000226872 2104 ntBASIC9.57□□□□□ -0.88
Herc2Q4U2R1 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Herc2Q4U2R1 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Herc2Q4U2R1 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Herc2Q4U2R1 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Herc2Q4U2R1 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Herc2Q4U2R1 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Herc2Q4U2R1 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC9.56□□□□□ -0.88
Herc2Q4U2R1 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Herc2Q4U2R1 Mir6404-201ENSMUST00000183699 94 ntBASIC9.56□□□□□ -0.88
Herc2Q4U2R1 AC154171.1-201ENSMUST00000224610 643 ntBASIC9.56□□□□□ -0.88
Herc2Q4U2R1 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Herc2Q4U2R1 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC9.56□□□□□ -0.88
Herc2Q4U2R1 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Herc2Q4U2R1 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Herc2Q4U2R1 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Herc2Q4U2R1 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Herc2Q4U2R1 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Herc2Q4U2R1 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Herc2Q4U2R1 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Herc2Q4U2R1 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Herc2Q4U2R1 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Herc2Q4U2R1 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Herc2Q4U2R1 Gm12957-201ENSMUST00000117835 377 ntBASIC9.56□□□□□ -0.88
Herc2Q4U2R1 Gm13226-201ENSMUST00000117838 404 ntBASIC9.56□□□□□ -0.88
Herc2Q4U2R1 Gm15782-201ENSMUST00000121073 445 ntBASIC9.56□□□□□ -0.88
Herc2Q4U2R1 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC9.56□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms