Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Gm10355-201ENSMUST00000097146 517 ntBASIC18.87■□□□□ 0.61
Prpf38aQ4FK66 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Prpf38aQ4FK66 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Prpf38aQ4FK66 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Prpf38aQ4FK66 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Prpf38aQ4FK66 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Prpf38aQ4FK66 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Prpf38aQ4FK66 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Prpf38aQ4FK66 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Prpf38aQ4FK66 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Prpf38aQ4FK66 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Prpf38aQ4FK66 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Prpf38aQ4FK66 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Prpf38aQ4FK66 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC18.86■□□□□ 0.61
Prpf38aQ4FK66 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Prpf38aQ4FK66 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Prpf38aQ4FK66 Gm2651-201ENSMUST00000203560 838 ntBASIC18.86■□□□□ 0.61
Prpf38aQ4FK66 Gm10060-201ENSMUST00000212002 111 ntBASIC18.86■□□□□ 0.61
Prpf38aQ4FK66 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Prpf38aQ4FK66 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Prpf38aQ4FK66 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Prpf38aQ4FK66 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Prpf38aQ4FK66 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC18.86■□□□□ 0.61
Prpf38aQ4FK66 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC18.86■□□□□ 0.61
Prpf38aQ4FK66 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
Prpf38aQ4FK66 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Prpf38aQ4FK66 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Prpf38aQ4FK66 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC18.85■□□□□ 0.61
Prpf38aQ4FK66 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Prpf38aQ4FK66 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Prpf38aQ4FK66 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Prpf38aQ4FK66 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Prpf38aQ4FK66 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Prpf38aQ4FK66 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Prpf38aQ4FK66 Gm13216-201ENSMUST00000117145 591 ntBASIC18.85■□□□□ 0.61
Prpf38aQ4FK66 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC18.85■□□□□ 0.61
Prpf38aQ4FK66 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC18.85■□□□□ 0.61
Prpf38aQ4FK66 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Prpf38aQ4FK66 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
Prpf38aQ4FK66 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC18.85■□□□□ 0.61
Prpf38aQ4FK66 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Prpf38aQ4FK66 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Prpf38aQ4FK66 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC18.85■□□□□ 0.61
Prpf38aQ4FK66 Gm8655-201ENSMUST00000221159 852 ntBASIC18.85■□□□□ 0.61
Prpf38aQ4FK66 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Prpf38aQ4FK66 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Prpf38aQ4FK66 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Prpf38aQ4FK66 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Prpf38aQ4FK66 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Prpf38aQ4FK66 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Prpf38aQ4FK66 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Prpf38aQ4FK66 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Prpf38aQ4FK66 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Prpf38aQ4FK66 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Prpf38aQ4FK66 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Prpf38aQ4FK66 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Prpf38aQ4FK66 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Prpf38aQ4FK66 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Prpf38aQ4FK66 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Prpf38aQ4FK66 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
Prpf38aQ4FK66 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Prpf38aQ4FK66 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Prpf38aQ4FK66 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Prpf38aQ4FK66 Gm13418-201ENSMUST00000119097 944 ntBASIC18.84■□□□□ 0.61
Prpf38aQ4FK66 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC18.84■□□□□ 0.61
Prpf38aQ4FK66 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Prpf38aQ4FK66 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Prpf38aQ4FK66 Gm43514-201ENSMUST00000198852 424 ntBASIC18.84■□□□□ 0.61
Prpf38aQ4FK66 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Prpf38aQ4FK66 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Prpf38aQ4FK66 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Prpf38aQ4FK66 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Prpf38aQ4FK66 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Prpf38aQ4FK66 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Prpf38aQ4FK66 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Prpf38aQ4FK66 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Prpf38aQ4FK66 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC18.84■□□□□ 0.61
Prpf38aQ4FK66 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Prpf38aQ4FK66 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Prpf38aQ4FK66 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Prpf38aQ4FK66 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Prpf38aQ4FK66 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Prpf38aQ4FK66 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Prpf38aQ4FK66 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Prpf38aQ4FK66 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Prpf38aQ4FK66 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Prpf38aQ4FK66 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Prpf38aQ4FK66 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Prpf38aQ4FK66 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.61
Prpf38aQ4FK66 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Prpf38aQ4FK66 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Prpf38aQ4FK66 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Prpf38aQ4FK66 Gm37584-201ENSMUST00000193595 1290 ntBASIC18.83■□□□□ 0.6
Prpf38aQ4FK66 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC18.83■□□□□ 0.6
Prpf38aQ4FK66 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Prpf38aQ4FK66 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Prpf38aQ4FK66 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Prpf38aQ4FK66 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
Prpf38aQ4FK66 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Prpf38aQ4FK66 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms