Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim80Q3V061 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Trim80Q3V061 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC16.78■□□□□ 0.28
Trim80Q3V061 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC16.78■□□□□ 0.28
Trim80Q3V061 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Trim80Q3V061 Gm42545-201ENSMUST00000202755 922 ntBASIC16.78■□□□□ 0.28
Trim80Q3V061 Gm3375-201ENSMUST00000203929 796 ntBASIC16.78■□□□□ 0.28
Trim80Q3V061 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim80Q3V061 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim80Q3V061 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Trim80Q3V061 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim80Q3V061 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim80Q3V061 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim80Q3V061 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.78■□□□□ 0.28
Trim80Q3V061 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.78■□□□□ 0.28
Trim80Q3V061 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC16.78■□□□□ 0.28
Trim80Q3V061 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC16.78■□□□□ 0.28
Trim80Q3V061 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim80Q3V061 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim80Q3V061 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trim80Q3V061 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim80Q3V061 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim80Q3V061 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Trim80Q3V061 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
Trim80Q3V061 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
Trim80Q3V061 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim80Q3V061 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Trim80Q3V061 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.77■□□□□ 0.28
Trim80Q3V061 Gm11539-201ENSMUST00000119837 557 ntBASIC16.77■□□□□ 0.28
Trim80Q3V061 Gm13436-201ENSMUST00000120418 567 ntBASIC16.77■□□□□ 0.28
Trim80Q3V061 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Trim80Q3V061 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC16.77■□□□□ 0.28
Trim80Q3V061 Gm37292-201ENSMUST00000192062 758 ntBASIC16.77■□□□□ 0.28
Trim80Q3V061 Gm21362-201ENSMUST00000194272 928 ntBASIC16.77■□□□□ 0.28
Trim80Q3V061 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.77■□□□□ 0.28
Trim80Q3V061 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trim80Q3V061 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.77■□□□□ 0.28
Trim80Q3V061 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim80Q3V061 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trim80Q3V061 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trim80Q3V061 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Trim80Q3V061 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trim80Q3V061 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC16.77■□□□□ 0.27
Trim80Q3V061 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trim80Q3V061 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trim80Q3V061 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trim80Q3V061 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.77■□□□□ 0.27
Trim80Q3V061 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trim80Q3V061 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC16.77■□□□□ 0.27
Trim80Q3V061 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Trim80Q3V061 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trim80Q3V061 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trim80Q3V061 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
Trim80Q3V061 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Trim80Q3V061 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trim80Q3V061 Gm7712-202ENSMUST00000222331 1510 ntBASIC16.76■□□□□ 0.27
Trim80Q3V061 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trim80Q3V061 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim80Q3V061 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim80Q3V061 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim80Q3V061 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
Trim80Q3V061 Gm12382-201ENSMUST00000122005 922 ntBASIC16.76■□□□□ 0.27
Trim80Q3V061 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Trim80Q3V061 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trim80Q3V061 Gm6659-201ENSMUST00000174752 547 ntBASIC16.76■□□□□ 0.27
Trim80Q3V061 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim80Q3V061 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim80Q3V061 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
Trim80Q3V061 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trim80Q3V061 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim80Q3V061 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim80Q3V061 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim80Q3V061 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim80Q3V061 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim80Q3V061 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim80Q3V061 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim80Q3V061 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Trim80Q3V061 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim80Q3V061 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim80Q3V061 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Trim80Q3V061 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trim80Q3V061 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC16.75■□□□□ 0.27
Trim80Q3V061 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim80Q3V061 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim80Q3V061 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Trim80Q3V061 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim80Q3V061 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim80Q3V061 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim80Q3V061 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim80Q3V061 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC16.75■□□□□ 0.27
Trim80Q3V061 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
Trim80Q3V061 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim80Q3V061 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.75■□□□□ 0.27
Trim80Q3V061 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim80Q3V061 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trim80Q3V061 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim80Q3V061 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trim80Q3V061 Gm10654-201ENSMUST00000098653 1633 ntBASIC16.74■□□□□ 0.27
Trim80Q3V061 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim80Q3V061 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms