Protein–RNA interactions for Protein: Q3UJV1

Ccdc61, Coiled-coil domain-containing protein 61, mousemouse

Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc61Q3UJV1 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc61Q3UJV1 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc61Q3UJV1 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc61Q3UJV1 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc61Q3UJV1 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.76■□□□□ 0.27
Ccdc61Q3UJV1 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc61Q3UJV1 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC16.76■□□□□ 0.27
Ccdc61Q3UJV1 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc61Q3UJV1 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC16.76■□□□□ 0.27
Ccdc61Q3UJV1 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC16.76■□□□□ 0.27
Ccdc61Q3UJV1 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc61Q3UJV1 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Ccdc61Q3UJV1 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc61Q3UJV1 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc61Q3UJV1 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc61Q3UJV1 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.76■□□□□ 0.27
Ccdc61Q3UJV1 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc61Q3UJV1 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc61Q3UJV1 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.75■□□□□ 0.27
Ccdc61Q3UJV1 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc61Q3UJV1 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc61Q3UJV1 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc61Q3UJV1 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.75■□□□□ 0.27
Ccdc61Q3UJV1 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc61Q3UJV1 Gm11452-201ENSMUST00000122376 690 ntBASIC16.75■□□□□ 0.27
Ccdc61Q3UJV1 Gm25406-201ENSMUST00000157599 105 ntBASIC16.75■□□□□ 0.27
Ccdc61Q3UJV1 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC16.75■□□□□ 0.27
Ccdc61Q3UJV1 Gm18195-201ENSMUST00000207604 706 ntBASIC16.75■□□□□ 0.27
Ccdc61Q3UJV1 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Ccdc61Q3UJV1 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc61Q3UJV1 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc61Q3UJV1 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc61Q3UJV1 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc61Q3UJV1 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Ccdc61Q3UJV1 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc61Q3UJV1 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc61Q3UJV1 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc61Q3UJV1 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc61Q3UJV1 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc61Q3UJV1 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Ccdc61Q3UJV1 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC16.74■□□□□ 0.27
Ccdc61Q3UJV1 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
Ccdc61Q3UJV1 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc61Q3UJV1 Gm8349-201ENSMUST00000182720 1003 ntBASIC16.74■□□□□ 0.27
Ccdc61Q3UJV1 Gm44357-201ENSMUST00000195897 142 ntBASIC16.74■□□□□ 0.27
Ccdc61Q3UJV1 Gm19658-201ENSMUST00000196231 138 ntBASIC16.74■□□□□ 0.27
Ccdc61Q3UJV1 Gm44367-201ENSMUST00000196836 138 ntBASIC16.74■□□□□ 0.27
Ccdc61Q3UJV1 Gm44350-201ENSMUST00000197197 138 ntBASIC16.74■□□□□ 0.27
Ccdc61Q3UJV1 Gm44390-201ENSMUST00000197533 144 ntBASIC16.74■□□□□ 0.27
Ccdc61Q3UJV1 Gm44313-201ENSMUST00000198018 138 ntBASIC16.74■□□□□ 0.27
Ccdc61Q3UJV1 Gm44486-201ENSMUST00000198508 138 ntBASIC16.74■□□□□ 0.27
Ccdc61Q3UJV1 Gm44314-201ENSMUST00000199263 138 ntBASIC16.74■□□□□ 0.27
Ccdc61Q3UJV1 Gm44394-201ENSMUST00000199558 138 ntBASIC16.74■□□□□ 0.27
Ccdc61Q3UJV1 Gm44484-201ENSMUST00000199873 138 ntBASIC16.74■□□□□ 0.27
Ccdc61Q3UJV1 Gm44466-201ENSMUST00000200264 138 ntBASIC16.74■□□□□ 0.27
Ccdc61Q3UJV1 Gm44359-201ENSMUST00000200671 138 ntBASIC16.74■□□□□ 0.27
Ccdc61Q3UJV1 Gm6376-201ENSMUST00000209407 580 ntBASIC16.74■□□□□ 0.27
Ccdc61Q3UJV1 Gm6296-201ENSMUST00000222599 943 ntBASIC16.74■□□□□ 0.27
Ccdc61Q3UJV1 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Ccdc61Q3UJV1 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc61Q3UJV1 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc61Q3UJV1 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc61Q3UJV1 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc61Q3UJV1 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Ccdc61Q3UJV1 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Ccdc61Q3UJV1 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc61Q3UJV1 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc61Q3UJV1 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc61Q3UJV1 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Ccdc61Q3UJV1 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc61Q3UJV1 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc61Q3UJV1 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc61Q3UJV1 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Ccdc61Q3UJV1 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc61Q3UJV1 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc61Q3UJV1 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Ccdc61Q3UJV1 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc61Q3UJV1 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc61Q3UJV1 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc61Q3UJV1 Gm7506-201ENSMUST00000207758 815 ntBASIC16.73■□□□□ 0.27
Ccdc61Q3UJV1 Vti1a-206ENSMUST00000225529 1244 ntBASIC16.73■□□□□ 0.27
Ccdc61Q3UJV1 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc61Q3UJV1 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC16.73■□□□□ 0.27
Ccdc61Q3UJV1 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.73■□□□□ 0.27
Ccdc61Q3UJV1 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc61Q3UJV1 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.73■□□□□ 0.27
Ccdc61Q3UJV1 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Ccdc61Q3UJV1 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Ccdc61Q3UJV1 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC16.73■□□□□ 0.27
Ccdc61Q3UJV1 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc61Q3UJV1 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc61Q3UJV1 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc61Q3UJV1 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.72■□□□□ 0.27
Ccdc61Q3UJV1 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc61Q3UJV1 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc61Q3UJV1 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc61Q3UJV1 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc61Q3UJV1 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc61Q3UJV1 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc61Q3UJV1 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms