Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sf3b2Q3UJB0 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Sf3b2Q3UJB0 Gm45612-201ENSMUST00000211320 160 ntBASIC20.91■□□□□ 0.94
Sf3b2Q3UJB0 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC20.91■□□□□ 0.94
Sf3b2Q3UJB0 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Sf3b2Q3UJB0 AC117588.1-201ENSMUST00000228510 999 ntBASIC20.91■□□□□ 0.94
Sf3b2Q3UJB0 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sf3b2Q3UJB0 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sf3b2Q3UJB0 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
Sf3b2Q3UJB0 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Sf3b2Q3UJB0 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Sf3b2Q3UJB0 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sf3b2Q3UJB0 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sf3b2Q3UJB0 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sf3b2Q3UJB0 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Sf3b2Q3UJB0 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Sf3b2Q3UJB0 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sf3b2Q3UJB0 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sf3b2Q3UJB0 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sf3b2Q3UJB0 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sf3b2Q3UJB0 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sf3b2Q3UJB0 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sf3b2Q3UJB0 Gm15427-201ENSMUST00000117288 531 ntBASIC20.9■□□□□ 0.94
Sf3b2Q3UJB0 Gm12428-201ENSMUST00000119844 727 ntBASIC20.9■□□□□ 0.94
Sf3b2Q3UJB0 Gm13597-201ENSMUST00000121239 375 ntBASIC20.9■□□□□ 0.94
Sf3b2Q3UJB0 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC20.9■□□□□ 0.94
Sf3b2Q3UJB0 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
Sf3b2Q3UJB0 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Sf3b2Q3UJB0 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Sf3b2Q3UJB0 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC20.9■□□□□ 0.94
Sf3b2Q3UJB0 AC124732.2-201ENSMUST00000221977 316 ntBASIC20.9■□□□□ 0.94
Sf3b2Q3UJB0 AC140397.2-201ENSMUST00000224213 834 ntBASIC20.9■□□□□ 0.94
Sf3b2Q3UJB0 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sf3b2Q3UJB0 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Sf3b2Q3UJB0 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sf3b2Q3UJB0 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sf3b2Q3UJB0 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Sf3b2Q3UJB0 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sf3b2Q3UJB0 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sf3b2Q3UJB0 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Sf3b2Q3UJB0 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
Sf3b2Q3UJB0 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Sf3b2Q3UJB0 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Sf3b2Q3UJB0 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Sf3b2Q3UJB0 Gm11745-201ENSMUST00000121669 448 ntBASIC20.89■□□□□ 0.93
Sf3b2Q3UJB0 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Sf3b2Q3UJB0 AC147366.1-201ENSMUST00000227671 852 ntBASIC20.89■□□□□ 0.93
Sf3b2Q3UJB0 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Sf3b2Q3UJB0 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Sf3b2Q3UJB0 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Sf3b2Q3UJB0 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Sf3b2Q3UJB0 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Sf3b2Q3UJB0 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sf3b2Q3UJB0 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sf3b2Q3UJB0 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
Sf3b2Q3UJB0 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sf3b2Q3UJB0 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sf3b2Q3UJB0 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Sf3b2Q3UJB0 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Sf3b2Q3UJB0 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Sf3b2Q3UJB0 Gm22175-201ENSMUST00000175007 78 ntBASIC20.88■□□□□ 0.93
Sf3b2Q3UJB0 Gm36967-201ENSMUST00000193814 266 ntBASIC20.88■□□□□ 0.93
Sf3b2Q3UJB0 Gm43474-201ENSMUST00000196415 774 ntBASIC20.88■□□□□ 0.93
Sf3b2Q3UJB0 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC20.88■□□□□ 0.93
Sf3b2Q3UJB0 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC20.88■□□□□ 0.93
Sf3b2Q3UJB0 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sf3b2Q3UJB0 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Sf3b2Q3UJB0 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sf3b2Q3UJB0 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Sf3b2Q3UJB0 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
Sf3b2Q3UJB0 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Sf3b2Q3UJB0 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sf3b2Q3UJB0 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Sf3b2Q3UJB0 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sf3b2Q3UJB0 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sf3b2Q3UJB0 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sf3b2Q3UJB0 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sf3b2Q3UJB0 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC20.87■□□□□ 0.93
Sf3b2Q3UJB0 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sf3b2Q3UJB0 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sf3b2Q3UJB0 Gm14127-201ENSMUST00000117906 678 ntBASIC20.87■□□□□ 0.93
Sf3b2Q3UJB0 Mir6990-201ENSMUST00000183724 91 ntBASIC20.87■□□□□ 0.93
Sf3b2Q3UJB0 Gm27301-201ENSMUST00000184012 127 ntBASIC20.87■□□□□ 0.93
Sf3b2Q3UJB0 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC20.87■□□□□ 0.93
Sf3b2Q3UJB0 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC20.87■□□□□ 0.93
Sf3b2Q3UJB0 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Sf3b2Q3UJB0 AC107711.5-202ENSMUST00000226429 702 ntBASIC20.87■□□□□ 0.93
Sf3b2Q3UJB0 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sf3b2Q3UJB0 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Sf3b2Q3UJB0 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sf3b2Q3UJB0 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Sf3b2Q3UJB0 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sf3b2Q3UJB0 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Sf3b2Q3UJB0 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Sf3b2Q3UJB0 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Sf3b2Q3UJB0 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC20.86■□□□□ 0.93
Sf3b2Q3UJB0 Gm12892-201ENSMUST00000117367 1146 ntBASIC20.86■□□□□ 0.93
Sf3b2Q3UJB0 Mir6404-201ENSMUST00000183699 94 ntBASIC20.86■□□□□ 0.93
Sf3b2Q3UJB0 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC20.86■□□□□ 0.93
Sf3b2Q3UJB0 Gm45747-201ENSMUST00000212203 999 ntBASIC20.86■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms