Protein–RNA interactions for Protein: Q3UHD6

Snx27, Sorting nexin-27, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx27Q3UHD6 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Snx27Q3UHD6 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC17.47■□□□□ 0.39
Snx27Q3UHD6 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Snx27Q3UHD6 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Snx27Q3UHD6 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
Snx27Q3UHD6 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Snx27Q3UHD6 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Snx27Q3UHD6 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Snx27Q3UHD6 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Snx27Q3UHD6 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
Snx27Q3UHD6 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Snx27Q3UHD6 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Snx27Q3UHD6 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC17.46■□□□□ 0.39
Snx27Q3UHD6 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Snx27Q3UHD6 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Snx27Q3UHD6 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Snx27Q3UHD6 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Snx27Q3UHD6 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.46■□□□□ 0.39
Snx27Q3UHD6 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Snx27Q3UHD6 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Snx27Q3UHD6 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.46■□□□□ 0.39
Snx27Q3UHD6 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Snx27Q3UHD6 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC17.46■□□□□ 0.39
Snx27Q3UHD6 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Snx27Q3UHD6 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Snx27Q3UHD6 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Snx27Q3UHD6 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Snx27Q3UHD6 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC17.46■□□□□ 0.39
Snx27Q3UHD6 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Snx27Q3UHD6 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Snx27Q3UHD6 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Snx27Q3UHD6 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
Snx27Q3UHD6 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Snx27Q3UHD6 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Snx27Q3UHD6 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Snx27Q3UHD6 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Snx27Q3UHD6 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Snx27Q3UHD6 Gm5837-201ENSMUST00000191844 1369 ntBASIC17.45■□□□□ 0.38
Snx27Q3UHD6 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Snx27Q3UHD6 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Snx27Q3UHD6 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Snx27Q3UHD6 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC17.45■□□□□ 0.38
Snx27Q3UHD6 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Snx27Q3UHD6 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC17.45■□□□□ 0.38
Snx27Q3UHD6 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC17.45■□□□□ 0.38
Snx27Q3UHD6 Gm8655-201ENSMUST00000221159 852 ntBASIC17.45■□□□□ 0.38
Snx27Q3UHD6 AC138767.1-201ENSMUST00000222661 415 ntBASIC17.45■□□□□ 0.38
Snx27Q3UHD6 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC17.45■□□□□ 0.38
Snx27Q3UHD6 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Snx27Q3UHD6 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Snx27Q3UHD6 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Snx27Q3UHD6 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Snx27Q3UHD6 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Snx27Q3UHD6 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Snx27Q3UHD6 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Snx27Q3UHD6 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Snx27Q3UHD6 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Snx27Q3UHD6 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Snx27Q3UHD6 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Snx27Q3UHD6 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Snx27Q3UHD6 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Snx27Q3UHD6 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Snx27Q3UHD6 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC17.44■□□□□ 0.38
Snx27Q3UHD6 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Snx27Q3UHD6 Gm11780-201ENSMUST00000136880 516 ntBASIC17.44■□□□□ 0.38
Snx27Q3UHD6 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Snx27Q3UHD6 Gm6443-201ENSMUST00000203599 874 ntBASIC17.44■□□□□ 0.38
Snx27Q3UHD6 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC17.44■□□□□ 0.38
Snx27Q3UHD6 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC17.44■□□□□ 0.38
Snx27Q3UHD6 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Snx27Q3UHD6 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Snx27Q3UHD6 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Snx27Q3UHD6 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Snx27Q3UHD6 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Snx27Q3UHD6 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.43■□□□□ 0.38
Snx27Q3UHD6 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Snx27Q3UHD6 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Snx27Q3UHD6 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Snx27Q3UHD6 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Snx27Q3UHD6 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Snx27Q3UHD6 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Snx27Q3UHD6 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC17.43■□□□□ 0.38
Snx27Q3UHD6 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Snx27Q3UHD6 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC17.43■□□□□ 0.38
Snx27Q3UHD6 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Snx27Q3UHD6 Gm7230-201ENSMUST00000173026 815 ntBASIC17.43■□□□□ 0.38
Snx27Q3UHD6 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC17.43■□□□□ 0.38
Snx27Q3UHD6 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Snx27Q3UHD6 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Snx27Q3UHD6 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC17.43■□□□□ 0.38
Snx27Q3UHD6 Gm43514-201ENSMUST00000198852 424 ntBASIC17.43■□□□□ 0.38
Snx27Q3UHD6 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Snx27Q3UHD6 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC17.43■□□□□ 0.38
Snx27Q3UHD6 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Snx27Q3UHD6 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Snx27Q3UHD6 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Snx27Q3UHD6 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC17.43■□□□□ 0.38
Snx27Q3UHD6 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Snx27Q3UHD6 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
Snx27Q3UHD6 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms