Protein–RNA interactions for Protein: Q3U435

Mmp25, Matrix metalloproteinase-25, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp25Q3U435 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Mmp25Q3U435 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Mmp25Q3U435 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Mmp25Q3U435 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Mmp25Q3U435 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Mmp25Q3U435 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Mmp25Q3U435 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Mmp25Q3U435 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
Mmp25Q3U435 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Mmp25Q3U435 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Mmp25Q3U435 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC15.22■□□□□ 0.03
Mmp25Q3U435 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp25Q3U435 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Mmp25Q3U435 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp25Q3U435 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp25Q3U435 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp25Q3U435 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp25Q3U435 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp25Q3U435 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp25Q3U435 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Mmp25Q3U435 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Mmp25Q3U435 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp25Q3U435 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp25Q3U435 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp25Q3U435 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp25Q3U435 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp25Q3U435 AC108846.1-201ENSMUST00000214531 513 ntBASIC15.22■□□□□ 0.03
Mmp25Q3U435 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp25Q3U435 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp25Q3U435 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp25Q3U435 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Mmp25Q3U435 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp25Q3U435 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp25Q3U435 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp25Q3U435 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Mmp25Q3U435 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Mmp25Q3U435 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Mmp25Q3U435 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp25Q3U435 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp25Q3U435 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp25Q3U435 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp25Q3U435 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Mmp25Q3U435 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Mmp25Q3U435 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Mmp25Q3U435 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Mmp25Q3U435 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15.21■□□□□ 0.03
Mmp25Q3U435 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Mmp25Q3U435 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Mmp25Q3U435 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Mmp25Q3U435 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Mmp25Q3U435 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Mmp25Q3U435 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Mmp25Q3U435 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Mmp25Q3U435 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Mmp25Q3U435 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC15.21■□□□□ 0.03
Mmp25Q3U435 Gm7507-201ENSMUST00000183053 1008 ntBASIC15.21■□□□□ 0.03
Mmp25Q3U435 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC15.21■□□□□ 0.03
Mmp25Q3U435 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC15.21■□□□□ 0.03
Mmp25Q3U435 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC15.21■□□□□ 0.03
Mmp25Q3U435 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Mmp25Q3U435 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Mmp25Q3U435 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Mmp25Q3U435 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Mmp25Q3U435 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Mmp25Q3U435 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Mmp25Q3U435 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Mmp25Q3U435 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC15.21■□□□□ 0.02
Mmp25Q3U435 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Mmp25Q3U435 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Mmp25Q3U435 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Mmp25Q3U435 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Mmp25Q3U435 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Mmp25Q3U435 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Mmp25Q3U435 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Mmp25Q3U435 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Mmp25Q3U435 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC15.2■□□□□ 0.02
Mmp25Q3U435 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Mmp25Q3U435 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Mmp25Q3U435 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Mmp25Q3U435 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC15.2■□□□□ 0.02
Mmp25Q3U435 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC15.2■□□□□ 0.02
Mmp25Q3U435 Gm1818-201ENSMUST00000169406 1184 ntBASIC15.2■□□□□ 0.02
Mmp25Q3U435 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Mmp25Q3U435 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Mmp25Q3U435 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Mmp25Q3U435 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Mmp25Q3U435 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Mmp25Q3U435 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Mmp25Q3U435 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC15.2■□□□□ 0.02
Mmp25Q3U435 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Mmp25Q3U435 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Mmp25Q3U435 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Mmp25Q3U435 Gm15743-202ENSMUST00000182690 1901 ntBASIC15.19■□□□□ 0.02
Mmp25Q3U435 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Mmp25Q3U435 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Mmp25Q3U435 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Mmp25Q3U435 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Mmp25Q3U435 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Mmp25Q3U435 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Mmp25Q3U435 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms