Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nhej1Q3KNJ2 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nhej1Q3KNJ2 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nhej1Q3KNJ2 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Nhej1Q3KNJ2 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
Nhej1Q3KNJ2 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nhej1Q3KNJ2 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Nhej1Q3KNJ2 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Nhej1Q3KNJ2 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nhej1Q3KNJ2 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nhej1Q3KNJ2 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
Nhej1Q3KNJ2 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Nhej1Q3KNJ2 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Nhej1Q3KNJ2 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Nhej1Q3KNJ2 Gm7370-201ENSMUST00000219471 767 ntBASIC17.3■□□□□ 0.36
Nhej1Q3KNJ2 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nhej1Q3KNJ2 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Nhej1Q3KNJ2 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Nhej1Q3KNJ2 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nhej1Q3KNJ2 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nhej1Q3KNJ2 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nhej1Q3KNJ2 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
Nhej1Q3KNJ2 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Nhej1Q3KNJ2 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Nhej1Q3KNJ2 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nhej1Q3KNJ2 Gm44616-201ENSMUST00000206417 1732 ntBASIC17.3■□□□□ 0.36
Nhej1Q3KNJ2 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nhej1Q3KNJ2 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC17.29■□□□□ 0.36
Nhej1Q3KNJ2 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nhej1Q3KNJ2 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nhej1Q3KNJ2 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nhej1Q3KNJ2 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nhej1Q3KNJ2 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Nhej1Q3KNJ2 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nhej1Q3KNJ2 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.29■□□□□ 0.36
Nhej1Q3KNJ2 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Nhej1Q3KNJ2 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nhej1Q3KNJ2 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Nhej1Q3KNJ2 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Nhej1Q3KNJ2 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nhej1Q3KNJ2 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nhej1Q3KNJ2 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nhej1Q3KNJ2 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nhej1Q3KNJ2 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nhej1Q3KNJ2 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Nhej1Q3KNJ2 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nhej1Q3KNJ2 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Nhej1Q3KNJ2 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Nhej1Q3KNJ2 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nhej1Q3KNJ2 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nhej1Q3KNJ2 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nhej1Q3KNJ2 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nhej1Q3KNJ2 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Nhej1Q3KNJ2 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Nhej1Q3KNJ2 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nhej1Q3KNJ2 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Nhej1Q3KNJ2 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Nhej1Q3KNJ2 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.28■□□□□ 0.36
Nhej1Q3KNJ2 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nhej1Q3KNJ2 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nhej1Q3KNJ2 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Nhej1Q3KNJ2 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.28■□□□□ 0.36
Nhej1Q3KNJ2 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.28■□□□□ 0.36
Nhej1Q3KNJ2 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Nhej1Q3KNJ2 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.28■□□□□ 0.36
Nhej1Q3KNJ2 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nhej1Q3KNJ2 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Nhej1Q3KNJ2 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nhej1Q3KNJ2 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Nhej1Q3KNJ2 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nhej1Q3KNJ2 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nhej1Q3KNJ2 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nhej1Q3KNJ2 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nhej1Q3KNJ2 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC17.28■□□□□ 0.36
Nhej1Q3KNJ2 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC17.28■□□□□ 0.36
Nhej1Q3KNJ2 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Nhej1Q3KNJ2 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nhej1Q3KNJ2 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nhej1Q3KNJ2 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nhej1Q3KNJ2 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Nhej1Q3KNJ2 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Nhej1Q3KNJ2 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nhej1Q3KNJ2 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC17.27■□□□□ 0.36
Nhej1Q3KNJ2 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nhej1Q3KNJ2 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nhej1Q3KNJ2 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nhej1Q3KNJ2 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.27■□□□□ 0.36
Nhej1Q3KNJ2 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.27■□□□□ 0.36
Nhej1Q3KNJ2 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.27■□□□□ 0.36
Nhej1Q3KNJ2 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nhej1Q3KNJ2 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nhej1Q3KNJ2 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
Nhej1Q3KNJ2 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Nhej1Q3KNJ2 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Nhej1Q3KNJ2 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.35
Nhej1Q3KNJ2 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Nhej1Q3KNJ2 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Nhej1Q3KNJ2 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Nhej1Q3KNJ2 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Nhej1Q3KNJ2 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms