Protein–RNA interactions for Protein: Q2MKA5

Chrna5, Neuronal acetylcholine receptor subunit alpha-5, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna5Q2MKA5 Gm37153-201ENSMUST00000193637 231 ntBASIC19.21■□□□□ 0.67
Chrna5Q2MKA5 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Chrna5Q2MKA5 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chrna5Q2MKA5 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chrna5Q2MKA5 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chrna5Q2MKA5 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chrna5Q2MKA5 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chrna5Q2MKA5 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Chrna5Q2MKA5 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chrna5Q2MKA5 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chrna5Q2MKA5 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chrna5Q2MKA5 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chrna5Q2MKA5 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chrna5Q2MKA5 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chrna5Q2MKA5 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Chrna5Q2MKA5 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC19.2■□□□□ 0.66
Chrna5Q2MKA5 Gm13597-201ENSMUST00000121239 375 ntBASIC19.2■□□□□ 0.66
Chrna5Q2MKA5 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Chrna5Q2MKA5 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Chrna5Q2MKA5 Gm17271-201ENSMUST00000165535 355 ntBASIC19.2■□□□□ 0.66
Chrna5Q2MKA5 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chrna5Q2MKA5 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC19.2■□□□□ 0.66
Chrna5Q2MKA5 Gm44492-201ENSMUST00000197012 141 ntBASIC19.2■□□□□ 0.66
Chrna5Q2MKA5 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chrna5Q2MKA5 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chrna5Q2MKA5 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Chrna5Q2MKA5 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Chrna5Q2MKA5 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Chrna5Q2MKA5 AC124549.3-201ENSMUST00000225541 367 ntBASIC19.2■□□□□ 0.66
Chrna5Q2MKA5 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Chrna5Q2MKA5 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chrna5Q2MKA5 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chrna5Q2MKA5 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chrna5Q2MKA5 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chrna5Q2MKA5 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Chrna5Q2MKA5 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chrna5Q2MKA5 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chrna5Q2MKA5 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC19.19■□□□□ 0.66
Chrna5Q2MKA5 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chrna5Q2MKA5 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chrna5Q2MKA5 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chrna5Q2MKA5 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC19.19■□□□□ 0.66
Chrna5Q2MKA5 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chrna5Q2MKA5 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Chrna5Q2MKA5 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Chrna5Q2MKA5 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chrna5Q2MKA5 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chrna5Q2MKA5 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Chrna5Q2MKA5 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
Chrna5Q2MKA5 AC139382.1-201ENSMUST00000221402 498 ntBASIC19.19■□□□□ 0.66
Chrna5Q2MKA5 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chrna5Q2MKA5 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chrna5Q2MKA5 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chrna5Q2MKA5 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chrna5Q2MKA5 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chrna5Q2MKA5 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC19.19■□□□□ 0.66
Chrna5Q2MKA5 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Chrna5Q2MKA5 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chrna5Q2MKA5 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chrna5Q2MKA5 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Chrna5Q2MKA5 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Chrna5Q2MKA5 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chrna5Q2MKA5 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chrna5Q2MKA5 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Chrna5Q2MKA5 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Chrna5Q2MKA5 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Chrna5Q2MKA5 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Chrna5Q2MKA5 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chrna5Q2MKA5 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
Chrna5Q2MKA5 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC19.18■□□□□ 0.66
Chrna5Q2MKA5 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC19.18■□□□□ 0.66
Chrna5Q2MKA5 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Chrna5Q2MKA5 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Chrna5Q2MKA5 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC19.18■□□□□ 0.66
Chrna5Q2MKA5 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chrna5Q2MKA5 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Chrna5Q2MKA5 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chrna5Q2MKA5 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chrna5Q2MKA5 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Chrna5Q2MKA5 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chrna5Q2MKA5 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chrna5Q2MKA5 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chrna5Q2MKA5 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Chrna5Q2MKA5 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Chrna5Q2MKA5 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chrna5Q2MKA5 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC19.17■□□□□ 0.66
Chrna5Q2MKA5 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.17■□□□□ 0.66
Chrna5Q2MKA5 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC19.17■□□□□ 0.66
Chrna5Q2MKA5 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Chrna5Q2MKA5 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC19.17■□□□□ 0.66
Chrna5Q2MKA5 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC19.17■□□□□ 0.66
Chrna5Q2MKA5 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chrna5Q2MKA5 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chrna5Q2MKA5 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chrna5Q2MKA5 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chrna5Q2MKA5 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chrna5Q2MKA5 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Chrna5Q2MKA5 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chrna5Q2MKA5 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Chrna5Q2MKA5 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms