Protein–RNA interactions for Protein: P97812

Ihh, Indian hedgehog protein, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IhhP97812 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
IhhP97812 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
IhhP97812 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
IhhP97812 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
IhhP97812 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.78■□□□□ 0.28
IhhP97812 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
IhhP97812 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
IhhP97812 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
IhhP97812 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
IhhP97812 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
IhhP97812 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
IhhP97812 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
IhhP97812 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
IhhP97812 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
IhhP97812 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
IhhP97812 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
IhhP97812 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
IhhP97812 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
IhhP97812 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
IhhP97812 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
IhhP97812 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
IhhP97812 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
IhhP97812 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
IhhP97812 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
IhhP97812 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
IhhP97812 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
IhhP97812 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
IhhP97812 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.76■□□□□ 0.27
IhhP97812 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC16.76■□□□□ 0.27
IhhP97812 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
IhhP97812 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
IhhP97812 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
IhhP97812 Gm5864-201ENSMUST00000202263 970 ntBASIC16.76■□□□□ 0.27
IhhP97812 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
IhhP97812 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC16.76■□□□□ 0.27
IhhP97812 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
IhhP97812 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
IhhP97812 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.76■□□□□ 0.27
IhhP97812 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
IhhP97812 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
IhhP97812 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
IhhP97812 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
IhhP97812 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
IhhP97812 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
IhhP97812 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
IhhP97812 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
IhhP97812 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
IhhP97812 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
IhhP97812 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
IhhP97812 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
IhhP97812 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
IhhP97812 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
IhhP97812 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
IhhP97812 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
IhhP97812 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
IhhP97812 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC16.75■□□□□ 0.27
IhhP97812 Gm13884-201ENSMUST00000118103 829 ntBASIC16.75■□□□□ 0.27
IhhP97812 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
IhhP97812 Gm13830-205ENSMUST00000201195 1155 ntBASIC16.75■□□□□ 0.27
IhhP97812 AC133598.3-202ENSMUST00000224219 531 ntBASIC16.75■□□□□ 0.27
IhhP97812 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC16.75■□□□□ 0.27
IhhP97812 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
IhhP97812 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
IhhP97812 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
IhhP97812 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
IhhP97812 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
IhhP97812 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC16.75■□□□□ 0.27
IhhP97812 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC16.75■□□□□ 0.27
IhhP97812 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
IhhP97812 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.75■□□□□ 0.27
IhhP97812 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.75■□□□□ 0.27
IhhP97812 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.75■□□□□ 0.27
IhhP97812 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
IhhP97812 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
IhhP97812 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
IhhP97812 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
IhhP97812 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
IhhP97812 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.74■□□□□ 0.27
IhhP97812 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
IhhP97812 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
IhhP97812 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
IhhP97812 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.74■□□□□ 0.27
IhhP97812 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
IhhP97812 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
IhhP97812 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
IhhP97812 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC16.74■□□□□ 0.27
IhhP97812 Gm4459-201ENSMUST00000118750 468 ntBASIC16.74■□□□□ 0.27
IhhP97812 Gm11452-201ENSMUST00000122376 690 ntBASIC16.74■□□□□ 0.27
IhhP97812 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC16.74■□□□□ 0.27
IhhP97812 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC16.74■□□□□ 0.27
IhhP97812 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
IhhP97812 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16.74■□□□□ 0.27
IhhP97812 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.74■□□□□ 0.27
IhhP97812 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
IhhP97812 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
IhhP97812 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
IhhP97812 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
IhhP97812 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
IhhP97812 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
IhhP97812 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms