Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Mir5130-201ENSMUST00000175160 84 ntBASIC16.53■□□□□ 0.24
Thumpd3P97770 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC16.53■□□□□ 0.24
Thumpd3P97770 Gm45058-201ENSMUST00000205810 766 ntBASIC16.53■□□□□ 0.24
Thumpd3P97770 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Thumpd3P97770 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Thumpd3P97770 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Thumpd3P97770 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Thumpd3P97770 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Thumpd3P97770 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Thumpd3P97770 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Thumpd3P97770 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Thumpd3P97770 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Thumpd3P97770 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Thumpd3P97770 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Thumpd3P97770 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Thumpd3P97770 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
Thumpd3P97770 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Thumpd3P97770 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC16.52■□□□□ 0.24
Thumpd3P97770 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Thumpd3P97770 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Thumpd3P97770 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Thumpd3P97770 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Thumpd3P97770 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Thumpd3P97770 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Thumpd3P97770 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC16.52■□□□□ 0.24
Thumpd3P97770 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Thumpd3P97770 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Thumpd3P97770 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Thumpd3P97770 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Thumpd3P97770 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Thumpd3P97770 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Thumpd3P97770 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Thumpd3P97770 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Thumpd3P97770 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Thumpd3P97770 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Thumpd3P97770 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Thumpd3P97770 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Thumpd3P97770 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC16.51■□□□□ 0.23
Thumpd3P97770 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Thumpd3P97770 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Thumpd3P97770 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Thumpd3P97770 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Thumpd3P97770 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.51■□□□□ 0.23
Thumpd3P97770 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Thumpd3P97770 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Thumpd3P97770 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC16.51■□□□□ 0.23
Thumpd3P97770 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Thumpd3P97770 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Thumpd3P97770 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Thumpd3P97770 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Thumpd3P97770 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.51■□□□□ 0.23
Thumpd3P97770 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Thumpd3P97770 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Thumpd3P97770 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.51■□□□□ 0.23
Thumpd3P97770 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Thumpd3P97770 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Thumpd3P97770 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Thumpd3P97770 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Thumpd3P97770 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.5■□□□□ 0.23
Thumpd3P97770 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Thumpd3P97770 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Thumpd3P97770 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC16.5■□□□□ 0.23
Thumpd3P97770 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Thumpd3P97770 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Thumpd3P97770 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Thumpd3P97770 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Thumpd3P97770 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC16.5■□□□□ 0.23
Thumpd3P97770 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC16.5■□□□□ 0.23
Thumpd3P97770 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.5■□□□□ 0.23
Thumpd3P97770 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.5■□□□□ 0.23
Thumpd3P97770 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Thumpd3P97770 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Thumpd3P97770 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Thumpd3P97770 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Thumpd3P97770 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Thumpd3P97770 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Thumpd3P97770 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Thumpd3P97770 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Thumpd3P97770 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Thumpd3P97770 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Thumpd3P97770 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Thumpd3P97770 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Thumpd3P97770 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Thumpd3P97770 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Thumpd3P97770 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Thumpd3P97770 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Thumpd3P97770 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Thumpd3P97770 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Thumpd3P97770 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Thumpd3P97770 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Thumpd3P97770 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Thumpd3P97770 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Thumpd3P97770 Gm10013-201ENSMUST00000106074 672 ntBASIC16.49■□□□□ 0.23
Thumpd3P97770 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Thumpd3P97770 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Thumpd3P97770 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Thumpd3P97770 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Thumpd3P97770 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Thumpd3P97770 Gm9731-201ENSMUST00000209480 747 ntBASIC16.49■□□□□ 0.23
Thumpd3P97770 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms