Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smarcc1P97496 Gm42939-201ENSMUST00000197514 2205 ntBASIC20.21■□□□□ 0.83
Smarcc1P97496 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Smarcc1P97496 Gm11620-201ENSMUST00000118770 1845 ntBASIC20.2■□□□□ 0.82
Smarcc1P97496 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Smarcc1P97496 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smarcc1P97496 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Smarcc1P97496 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Smarcc1P97496 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC20.2■□□□□ 0.82
Smarcc1P97496 Gm4609-201ENSMUST00000106443 1002 ntBASIC20.2■□□□□ 0.82
Smarcc1P97496 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC20.2■□□□□ 0.82
Smarcc1P97496 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC20.2■□□□□ 0.82
Smarcc1P97496 Gm5138-201ENSMUST00000113842 1002 ntBASIC20.2■□□□□ 0.82
Smarcc1P97496 Gm15191-201ENSMUST00000117933 1000 ntBASIC20.2■□□□□ 0.82
Smarcc1P97496 Gm12182-201ENSMUST00000118655 1008 ntBASIC20.2■□□□□ 0.82
Smarcc1P97496 Gm13882-201ENSMUST00000120886 1002 ntBASIC20.2■□□□□ 0.82
Smarcc1P97496 Gm10284-201ENSMUST00000145057 1005 ntBASIC20.2■□□□□ 0.82
Smarcc1P97496 Gm10481-201ENSMUST00000179228 1002 ntBASIC20.2■□□□□ 0.82
Smarcc1P97496 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC20.2■□□□□ 0.82
Smarcc1P97496 Gm2574-201ENSMUST00000181051 1002 ntBASIC20.2■□□□□ 0.82
Smarcc1P97496 Gm3200-201ENSMUST00000181493 1002 ntBASIC20.2■□□□□ 0.82
Smarcc1P97496 Gm8825-201ENSMUST00000182565 998 ntBASIC20.2■□□□□ 0.82
Smarcc1P97496 Gm4518-201ENSMUST00000182638 718 ntBASIC20.2■□□□□ 0.82
Smarcc1P97496 Gm8330-201ENSMUST00000182754 1008 ntBASIC20.2■□□□□ 0.82
Smarcc1P97496 Gm4575-201ENSMUST00000182991 1002 ntBASIC20.2■□□□□ 0.82
Smarcc1P97496 Gm8709-201ENSMUST00000183230 1012 ntBASIC20.2■□□□□ 0.82
Smarcc1P97496 Gm45167-201ENSMUST00000208007 322 ntBASIC20.2■□□□□ 0.82
Smarcc1P97496 Gm10293-201ENSMUST00000076317 1002 ntBASIC20.2■□□□□ 0.82
Smarcc1P97496 Gm6316-201ENSMUST00000082064 1020 ntBASIC20.2■□□□□ 0.82
Smarcc1P97496 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC20.2■□□□□ 0.82
Smarcc1P97496 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Smarcc1P97496 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smarcc1P97496 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smarcc1P97496 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smarcc1P97496 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smarcc1P97496 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Smarcc1P97496 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Smarcc1P97496 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC20.2■□□□□ 0.82
Smarcc1P97496 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smarcc1P97496 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Smarcc1P97496 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smarcc1P97496 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smarcc1P97496 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC20.19■□□□□ 0.82
Smarcc1P97496 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smarcc1P97496 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smarcc1P97496 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smarcc1P97496 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Smarcc1P97496 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smarcc1P97496 Gm14057-201ENSMUST00000120631 482 ntBASIC20.19■□□□□ 0.82
Smarcc1P97496 Gm17271-201ENSMUST00000165535 355 ntBASIC20.19■□□□□ 0.82
Smarcc1P97496 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC20.19■□□□□ 0.82
Smarcc1P97496 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
Smarcc1P97496 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smarcc1P97496 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Smarcc1P97496 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smarcc1P97496 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smarcc1P97496 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smarcc1P97496 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smarcc1P97496 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Smarcc1P97496 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smarcc1P97496 Gm19439-201ENSMUST00000198195 2273 ntBASIC20.18■□□□□ 0.82
Smarcc1P97496 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smarcc1P97496 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Smarcc1P97496 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smarcc1P97496 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC20.18■□□□□ 0.82
Smarcc1P97496 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smarcc1P97496 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smarcc1P97496 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Smarcc1P97496 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smarcc1P97496 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smarcc1P97496 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smarcc1P97496 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smarcc1P97496 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Smarcc1P97496 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Smarcc1P97496 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smarcc1P97496 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Smarcc1P97496 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Smarcc1P97496 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smarcc1P97496 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smarcc1P97496 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smarcc1P97496 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smarcc1P97496 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC20.17■□□□□ 0.82
Smarcc1P97496 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smarcc1P97496 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smarcc1P97496 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smarcc1P97496 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smarcc1P97496 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC20.17■□□□□ 0.82
Smarcc1P97496 Gm27300-201ENSMUST00000184085 97 ntBASIC20.17■□□□□ 0.82
Smarcc1P97496 Gm27335-201ENSMUST00000184758 97 ntBASIC20.17■□□□□ 0.82
Smarcc1P97496 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
Smarcc1P97496 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smarcc1P97496 AC117588.1-201ENSMUST00000228510 999 ntBASIC20.17■□□□□ 0.82
Smarcc1P97496 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smarcc1P97496 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smarcc1P97496 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smarcc1P97496 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smarcc1P97496 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smarcc1P97496 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smarcc1P97496 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smarcc1P97496 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms