Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Npas1P97459 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Npas1P97459 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Npas1P97459 Gm11249-201ENSMUST00000117071 859 ntBASIC13.64□□□□□ -0.23
Npas1P97459 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Npas1P97459 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC13.64□□□□□ -0.23
Npas1P97459 AC166341.7-201ENSMUST00000221698 126 ntBASIC13.64□□□□□ -0.23
Npas1P97459 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Npas1P97459 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC13.64□□□□□ -0.23
Npas1P97459 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Npas1P97459 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Npas1P97459 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.64□□□□□ -0.23
Npas1P97459 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Npas1P97459 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Npas1P97459 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Npas1P97459 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Npas1P97459 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Npas1P97459 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Npas1P97459 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Npas1P97459 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Npas1P97459 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Npas1P97459 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Npas1P97459 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Npas1P97459 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Npas1P97459 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Npas1P97459 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Npas1P97459 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Npas1P97459 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Npas1P97459 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Npas1P97459 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC13.63□□□□□ -0.23
Npas1P97459 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Npas1P97459 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Npas1P97459 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Npas1P97459 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Npas1P97459 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Npas1P97459 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Npas1P97459 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Npas1P97459 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Npas1P97459 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
Npas1P97459 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Npas1P97459 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Npas1P97459 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Npas1P97459 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Npas1P97459 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Npas1P97459 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Npas1P97459 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Npas1P97459 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Npas1P97459 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Npas1P97459 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Npas1P97459 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Npas1P97459 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Npas1P97459 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Npas1P97459 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Npas1P97459 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Npas1P97459 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC13.63□□□□□ -0.23
Npas1P97459 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Npas1P97459 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Npas1P97459 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Npas1P97459 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Npas1P97459 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Npas1P97459 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Npas1P97459 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Npas1P97459 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Npas1P97459 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Npas1P97459 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Npas1P97459 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Npas1P97459 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Npas1P97459 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Npas1P97459 Gm12896-201ENSMUST00000118430 226 ntBASIC13.62□□□□□ -0.23
Npas1P97459 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Npas1P97459 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC13.62□□□□□ -0.23
Npas1P97459 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Npas1P97459 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Npas1P97459 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Npas1P97459 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Npas1P97459 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.62□□□□□ -0.23
Npas1P97459 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Npas1P97459 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Npas1P97459 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Npas1P97459 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Npas1P97459 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Npas1P97459 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
Npas1P97459 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Npas1P97459 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Npas1P97459 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Npas1P97459 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Npas1P97459 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Npas1P97459 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC13.61□□□□□ -0.23
Npas1P97459 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Npas1P97459 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Npas1P97459 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Npas1P97459 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Npas1P97459 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Npas1P97459 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Npas1P97459 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.61□□□□□ -0.23
Npas1P97459 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.61□□□□□ -0.23
Npas1P97459 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Npas1P97459 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Npas1P97459 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Npas1P97459 Gm43072-201ENSMUST00000200283 1671 ntBASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms