Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC14.92□□□□□ -0.02
Cacna1aP97445 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Cacna1aP97445 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cacna1aP97445 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cacna1aP97445 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cacna1aP97445 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cacna1aP97445 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Cacna1aP97445 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cacna1aP97445 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cacna1aP97445 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cacna1aP97445 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cacna1aP97445 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cacna1aP97445 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cacna1aP97445 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC14.91□□□□□ -0.02
Cacna1aP97445 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cacna1aP97445 Gm3928-201ENSMUST00000121141 1307 ntBASIC14.91□□□□□ -0.02
Cacna1aP97445 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cacna1aP97445 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC14.91□□□□□ -0.02
Cacna1aP97445 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC14.91□□□□□ -0.02
Cacna1aP97445 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cacna1aP97445 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Cacna1aP97445 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC14.91□□□□□ -0.02
Cacna1aP97445 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cacna1aP97445 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cacna1aP97445 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cacna1aP97445 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cacna1aP97445 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cacna1aP97445 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cacna1aP97445 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cacna1aP97445 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cacna1aP97445 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC14.91□□□□□ -0.02
Cacna1aP97445 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cacna1aP97445 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cacna1aP97445 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Cacna1aP97445 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cacna1aP97445 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.91□□□□□ -0.02
Cacna1aP97445 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cacna1aP97445 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
Cacna1aP97445 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Cacna1aP97445 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cacna1aP97445 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14.91□□□□□ -0.02
Cacna1aP97445 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Cacna1aP97445 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cacna1aP97445 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cacna1aP97445 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cacna1aP97445 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cacna1aP97445 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Cacna1aP97445 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cacna1aP97445 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cacna1aP97445 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cacna1aP97445 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC14.9□□□□□ -0.02
Cacna1aP97445 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cacna1aP97445 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC14.9□□□□□ -0.02
Cacna1aP97445 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cacna1aP97445 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
Cacna1aP97445 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cacna1aP97445 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cacna1aP97445 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cacna1aP97445 Gm7222-201ENSMUST00000117512 906 ntBASIC14.9□□□□□ -0.02
Cacna1aP97445 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cacna1aP97445 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC14.9□□□□□ -0.02
Cacna1aP97445 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.9□□□□□ -0.02
Cacna1aP97445 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cacna1aP97445 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC14.9□□□□□ -0.02
Cacna1aP97445 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cacna1aP97445 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Cacna1aP97445 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cacna1aP97445 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cacna1aP97445 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cacna1aP97445 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Cacna1aP97445 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cacna1aP97445 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Cacna1aP97445 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cacna1aP97445 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cacna1aP97445 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cacna1aP97445 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cacna1aP97445 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cacna1aP97445 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cacna1aP97445 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cacna1aP97445 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC14.89□□□□□ -0.03
Cacna1aP97445 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cacna1aP97445 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Cacna1aP97445 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cacna1aP97445 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cacna1aP97445 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cacna1aP97445 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cacna1aP97445 Gm27646-201ENSMUST00000183989 110 ntBASIC14.89□□□□□ -0.03
Cacna1aP97445 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cacna1aP97445 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC14.89□□□□□ -0.03
Cacna1aP97445 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cacna1aP97445 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cacna1aP97445 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Cacna1aP97445 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cacna1aP97445 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cacna1aP97445 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cacna1aP97445 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cacna1aP97445 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cacna1aP97445 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cacna1aP97445 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cacna1aP97445 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms