Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 AC166341.4-201ENSMUST00000220625 123 ntBASIC11.04□□□□□ -0.64
PrkdcP97313 CT030684.1-201ENSMUST00000227292 914 ntBASIC11.04□□□□□ -0.64
PrkdcP97313 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
PrkdcP97313 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
PrkdcP97313 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
PrkdcP97313 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
PrkdcP97313 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
PrkdcP97313 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
PrkdcP97313 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
PrkdcP97313 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC11.04□□□□□ -0.64
PrkdcP97313 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
PrkdcP97313 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
PrkdcP97313 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
PrkdcP97313 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC11.04□□□□□ -0.64
PrkdcP97313 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
PrkdcP97313 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
PrkdcP97313 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
PrkdcP97313 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC11.03□□□□□ -0.64
PrkdcP97313 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
PrkdcP97313 Gm18057-201ENSMUST00000208220 503 ntBASIC11.03□□□□□ -0.64
PrkdcP97313 AC135669.1-201ENSMUST00000213585 412 ntBASIC11.03□□□□□ -0.64
PrkdcP97313 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
PrkdcP97313 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
PrkdcP97313 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
PrkdcP97313 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
PrkdcP97313 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
PrkdcP97313 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
PrkdcP97313 Gm15163-201ENSMUST00000120749 1302 ntBASIC11.03□□□□□ -0.64
PrkdcP97313 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC11.03□□□□□ -0.64
PrkdcP97313 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
PrkdcP97313 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
PrkdcP97313 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
PrkdcP97313 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
PrkdcP97313 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
PrkdcP97313 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
PrkdcP97313 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
PrkdcP97313 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
PrkdcP97313 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
PrkdcP97313 Gm43808-201ENSMUST00000202534 2065 ntBASIC11.03□□□□□ -0.64
PrkdcP97313 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
PrkdcP97313 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC11.03□□□□□ -0.64
PrkdcP97313 Gm17837-201ENSMUST00000186435 985 ntBASIC11.03□□□□□ -0.64
PrkdcP97313 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
PrkdcP97313 Gm6180-201ENSMUST00000065243 498 ntBASIC11.03□□□□□ -0.64
PrkdcP97313 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
PrkdcP97313 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
PrkdcP97313 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
PrkdcP97313 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
PrkdcP97313 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
PrkdcP97313 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
PrkdcP97313 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
PrkdcP97313 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC11.03□□□□□ -0.64
PrkdcP97313 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
PrkdcP97313 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC11.03□□□□□ -0.64
PrkdcP97313 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
PrkdcP97313 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
PrkdcP97313 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
PrkdcP97313 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
PrkdcP97313 Gm29541-201ENSMUST00000191351 678 ntBASIC11.02□□□□□ -0.64
PrkdcP97313 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
PrkdcP97313 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
PrkdcP97313 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
PrkdcP97313 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
PrkdcP97313 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC11.02□□□□□ -0.65
PrkdcP97313 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
PrkdcP97313 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
PrkdcP97313 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC11.02□□□□□ -0.65
PrkdcP97313 Gm18766-201ENSMUST00000189811 808 ntBASIC11.02□□□□□ -0.65
PrkdcP97313 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
PrkdcP97313 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
PrkdcP97313 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
PrkdcP97313 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
PrkdcP97313 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
PrkdcP97313 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
PrkdcP97313 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
PrkdcP97313 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
PrkdcP97313 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
PrkdcP97313 Iqck-206ENSMUST00000208658 2891 ntBASIC11.02□□□□□ -0.65
PrkdcP97313 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
PrkdcP97313 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
PrkdcP97313 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
PrkdcP97313 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
PrkdcP97313 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
PrkdcP97313 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
PrkdcP97313 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
PrkdcP97313 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
PrkdcP97313 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
PrkdcP97313 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
PrkdcP97313 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
PrkdcP97313 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
PrkdcP97313 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
PrkdcP97313 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
PrkdcP97313 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
PrkdcP97313 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
PrkdcP97313 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC11.01□□□□□ -0.65
PrkdcP97313 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
PrkdcP97313 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC11.01□□□□□ -0.65
PrkdcP97313 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
PrkdcP97313 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
PrkdcP97313 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms