Protein–RNA interactions for Protein: P70362

Ufd1, Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1P70362 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ufd1P70362 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ufd1P70362 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ufd1P70362 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ufd1P70362 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ufd1P70362 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ufd1P70362 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ufd1P70362 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC13.97□□□□□ -0.17
Ufd1P70362 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ufd1P70362 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Ufd1P70362 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ufd1P70362 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Ufd1P70362 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ufd1P70362 Ntrk2-205ENSMUST00000224402 2284 ntBASIC13.97□□□□□ -0.17
Ufd1P70362 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ufd1P70362 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ufd1P70362 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ufd1P70362 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ufd1P70362 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ufd1P70362 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC13.97□□□□□ -0.17
Ufd1P70362 Gm6211-202ENSMUST00000167849 925 ntBASIC13.97□□□□□ -0.17
Ufd1P70362 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC13.97□□□□□ -0.17
Ufd1P70362 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC13.97□□□□□ -0.17
Ufd1P70362 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ufd1P70362 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC13.97□□□□□ -0.17
Ufd1P70362 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ufd1P70362 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ufd1P70362 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ufd1P70362 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ufd1P70362 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Ufd1P70362 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC13.97□□□□□ -0.17
Ufd1P70362 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ufd1P70362 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Ufd1P70362 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ufd1P70362 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ufd1P70362 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ufd1P70362 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Ufd1P70362 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC13.96□□□□□ -0.17
Ufd1P70362 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ufd1P70362 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ufd1P70362 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Ufd1P70362 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Ufd1P70362 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC13.96□□□□□ -0.17
Ufd1P70362 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ufd1P70362 Gm5408-201ENSMUST00000197998 747 ntBASIC13.96□□□□□ -0.17
Ufd1P70362 Gm10138-203ENSMUST00000206952 366 ntBASIC13.96□□□□□ -0.17
Ufd1P70362 Gm18671-201ENSMUST00000214826 683 ntBASIC13.96□□□□□ -0.17
Ufd1P70362 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ufd1P70362 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ufd1P70362 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ufd1P70362 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ufd1P70362 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ufd1P70362 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ufd1P70362 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC13.96□□□□□ -0.17
Ufd1P70362 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ufd1P70362 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
Ufd1P70362 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ufd1P70362 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Ufd1P70362 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
Ufd1P70362 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ufd1P70362 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Ufd1P70362 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.95□□□□□ -0.18
Ufd1P70362 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ufd1P70362 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Ufd1P70362 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ufd1P70362 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ufd1P70362 Gm15847-201ENSMUST00000121417 1065 ntBASIC13.95□□□□□ -0.18
Ufd1P70362 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC13.95□□□□□ -0.18
Ufd1P70362 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Ufd1P70362 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ufd1P70362 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ufd1P70362 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Ufd1P70362 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ufd1P70362 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ufd1P70362 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ufd1P70362 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ufd1P70362 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ufd1P70362 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ufd1P70362 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
Ufd1P70362 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ufd1P70362 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ufd1P70362 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ufd1P70362 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ufd1P70362 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ufd1P70362 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
Ufd1P70362 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ufd1P70362 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ufd1P70362 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ufd1P70362 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ufd1P70362 Gm45760-201ENSMUST00000212190 1782 ntBASIC13.94□□□□□ -0.18
Ufd1P70362 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ufd1P70362 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
Ufd1P70362 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ufd1P70362 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ufd1P70362 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ufd1P70362 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Ufd1P70362 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ufd1P70362 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ufd1P70362 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ufd1P70362 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms