Protein–RNA interactions for Protein: P62322

Lsm5, U6 snRNA-associated Sm-like protein LSm5, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm5P62322 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lsm5P62322 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lsm5P62322 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Lsm5P62322 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Lsm5P62322 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC13.58□□□□□ -0.24
Lsm5P62322 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Lsm5P62322 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lsm5P62322 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Lsm5P62322 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lsm5P62322 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lsm5P62322 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lsm5P62322 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lsm5P62322 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lsm5P62322 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC13.57□□□□□ -0.24
Lsm5P62322 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Lsm5P62322 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lsm5P62322 Gm7290-201ENSMUST00000104990 617 ntBASIC13.57□□□□□ -0.24
Lsm5P62322 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lsm5P62322 Gm12918-201ENSMUST00000120234 636 ntBASIC13.57□□□□□ -0.24
Lsm5P62322 Gm15710-201ENSMUST00000121821 636 ntBASIC13.57□□□□□ -0.24
Lsm5P62322 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Lsm5P62322 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC13.57□□□□□ -0.24
Lsm5P62322 Gm5075-201ENSMUST00000196916 622 ntBASIC13.57□□□□□ -0.24
Lsm5P62322 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lsm5P62322 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC13.57□□□□□ -0.24
Lsm5P62322 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC13.57□□□□□ -0.24
Lsm5P62322 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lsm5P62322 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lsm5P62322 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Lsm5P62322 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Lsm5P62322 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Lsm5P62322 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lsm5P62322 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Lsm5P62322 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lsm5P62322 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lsm5P62322 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC13.57□□□□□ -0.24
Lsm5P62322 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lsm5P62322 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lsm5P62322 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lsm5P62322 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC13.56□□□□□ -0.24
Lsm5P62322 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC13.56□□□□□ -0.24
Lsm5P62322 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lsm5P62322 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lsm5P62322 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lsm5P62322 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lsm5P62322 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Lsm5P62322 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lsm5P62322 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Lsm5P62322 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lsm5P62322 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lsm5P62322 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Lsm5P62322 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lsm5P62322 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lsm5P62322 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lsm5P62322 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lsm5P62322 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lsm5P62322 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC13.56□□□□□ -0.24
Lsm5P62322 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Lsm5P62322 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Lsm5P62322 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lsm5P62322 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lsm5P62322 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm5P62322 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Lsm5P62322 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm5P62322 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm5P62322 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm5P62322 Gm45560-201ENSMUST00000211492 1472 ntBASIC13.55□□□□□ -0.24
Lsm5P62322 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm5P62322 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm5P62322 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm5P62322 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Lsm5P62322 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm5P62322 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Lsm5P62322 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm5P62322 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Lsm5P62322 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm5P62322 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm5P62322 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm5P62322 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm5P62322 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm5P62322 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm5P62322 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm5P62322 Gm37812-201ENSMUST00000195216 2475 ntBASIC13.55□□□□□ -0.24
Lsm5P62322 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm5P62322 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm5P62322 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm5P62322 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm5P62322 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm5P62322 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm5P62322 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC13.55□□□□□ -0.24
Lsm5P62322 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm5P62322 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lsm5P62322 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.54□□□□□ -0.24
Lsm5P62322 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lsm5P62322 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
Lsm5P62322 Gm42901-201ENSMUST00000197735 3171 ntBASIC13.54□□□□□ -0.24
Lsm5P62322 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Lsm5P62322 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lsm5P62322 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lsm5P62322 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms