Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdh11P55288 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdh11P55288 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdh11P55288 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Cdh11P55288 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.81□□□□□ -0.04
Cdh11P55288 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.81□□□□□ -0.04
Cdh11P55288 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdh11P55288 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC14.81□□□□□ -0.04
Cdh11P55288 AC133083.1-201ENSMUST00000221736 2209 ntBASIC14.81□□□□□ -0.04
Cdh11P55288 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdh11P55288 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Cdh11P55288 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdh11P55288 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cdh11P55288 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdh11P55288 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdh11P55288 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdh11P55288 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdh11P55288 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.8□□□□□ -0.04
Cdh11P55288 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdh11P55288 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
Cdh11P55288 Gm16061-201ENSMUST00000122167 857 ntBASIC14.8□□□□□ -0.04
Cdh11P55288 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cdh11P55288 Gm37025-201ENSMUST00000195159 829 ntBASIC14.8□□□□□ -0.04
Cdh11P55288 AC134329.2-201ENSMUST00000217897 428 ntBASIC14.8□□□□□ -0.04
Cdh11P55288 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdh11P55288 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Cdh11P55288 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdh11P55288 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Cdh11P55288 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdh11P55288 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdh11P55288 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdh11P55288 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
Cdh11P55288 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14.8□□□□□ -0.04
Cdh11P55288 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.8□□□□□ -0.04
Cdh11P55288 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
Cdh11P55288 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdh11P55288 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Cdh11P55288 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cdh11P55288 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cdh11P55288 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdh11P55288 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cdh11P55288 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Cdh11P55288 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Cdh11P55288 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdh11P55288 Gm4217-201ENSMUST00000182243 1002 ntBASIC14.79□□□□□ -0.04
Cdh11P55288 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cdh11P55288 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Cdh11P55288 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdh11P55288 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC14.79□□□□□ -0.04
Cdh11P55288 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
Cdh11P55288 Gm9731-201ENSMUST00000209480 747 ntBASIC14.79□□□□□ -0.04
Cdh11P55288 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC14.79□□□□□ -0.04
Cdh11P55288 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC14.79□□□□□ -0.04
Cdh11P55288 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cdh11P55288 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
Cdh11P55288 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdh11P55288 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Cdh11P55288 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdh11P55288 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdh11P55288 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cdh11P55288 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdh11P55288 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdh11P55288 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdh11P55288 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdh11P55288 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdh11P55288 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdh11P55288 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdh11P55288 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdh11P55288 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdh11P55288 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdh11P55288 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdh11P55288 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdh11P55288 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cdh11P55288 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.78□□□□□ -0.04
Cdh11P55288 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC14.78□□□□□ -0.04
Cdh11P55288 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdh11P55288 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Cdh11P55288 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Cdh11P55288 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdh11P55288 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cdh11P55288 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC14.78□□□□□ -0.04
Cdh11P55288 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdh11P55288 Gm22697-201ENSMUST00000175194 63 ntBASIC14.78□□□□□ -0.04
Cdh11P55288 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cdh11P55288 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC14.78□□□□□ -0.04
Cdh11P55288 Gm18032-201ENSMUST00000222541 538 ntBASIC14.78□□□□□ -0.04
Cdh11P55288 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdh11P55288 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdh11P55288 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdh11P55288 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC14.78□□□□□ -0.04
Cdh11P55288 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.78□□□□□ -0.04
Cdh11P55288 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.78□□□□□ -0.04
Cdh11P55288 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC14.78□□□□□ -0.04
Cdh11P55288 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Cdh11P55288 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdh11P55288 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Cdh11P55288 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdh11P55288 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdh11P55288 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cdh11P55288 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms