Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cdkn2bP55271 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cdkn2bP55271 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cdkn2bP55271 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cdkn2bP55271 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cdkn2bP55271 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdkn2bP55271 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Cdkn2bP55271 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdkn2bP55271 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Cdkn2bP55271 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cdkn2bP55271 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cdkn2bP55271 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdkn2bP55271 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdkn2bP55271 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cdkn2bP55271 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cdkn2bP55271 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cdkn2bP55271 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdkn2bP55271 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cdkn2bP55271 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cdkn2bP55271 Gm8520-201ENSMUST00000186517 868 ntBASIC15.55■□□□□ 0.08
Cdkn2bP55271 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdkn2bP55271 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdkn2bP55271 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdkn2bP55271 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Cdkn2bP55271 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cdkn2bP55271 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdkn2bP55271 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdkn2bP55271 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC15.54■□□□□ 0.08
Cdkn2bP55271 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdkn2bP55271 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC15.54■□□□□ 0.08
Cdkn2bP55271 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdkn2bP55271 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC15.54■□□□□ 0.08
Cdkn2bP55271 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdkn2bP55271 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC15.54■□□□□ 0.08
Cdkn2bP55271 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdkn2bP55271 Gm15039-201ENSMUST00000118914 875 ntBASIC15.54■□□□□ 0.08
Cdkn2bP55271 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cdkn2bP55271 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdkn2bP55271 Gm29707-201ENSMUST00000196325 491 ntBASIC15.54■□□□□ 0.08
Cdkn2bP55271 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC15.54■□□□□ 0.08
Cdkn2bP55271 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdkn2bP55271 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cdkn2bP55271 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdkn2bP55271 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Cdkn2bP55271 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdkn2bP55271 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cdkn2bP55271 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdkn2bP55271 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdkn2bP55271 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdkn2bP55271 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdkn2bP55271 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdkn2bP55271 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC15.53■□□□□ 0.08
Cdkn2bP55271 Gm15442-201ENSMUST00000117905 1527 ntBASIC15.53■□□□□ 0.08
Cdkn2bP55271 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdkn2bP55271 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cdkn2bP55271 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Cdkn2bP55271 Spsb2-203ENSMUST00000112473 1322 ntBASIC15.53■□□□□ 0.08
Cdkn2bP55271 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdkn2bP55271 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cdkn2bP55271 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC15.53■□□□□ 0.08
Cdkn2bP55271 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cdkn2bP55271 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cdkn2bP55271 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
Cdkn2bP55271 Gm29994-201ENSMUST00000195495 1193 ntBASIC15.53■□□□□ 0.08
Cdkn2bP55271 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC15.53■□□□□ 0.08
Cdkn2bP55271 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdkn2bP55271 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cdkn2bP55271 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cdkn2bP55271 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cdkn2bP55271 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdkn2bP55271 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdkn2bP55271 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Cdkn2bP55271 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdkn2bP55271 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Cdkn2bP55271 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdkn2bP55271 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cdkn2bP55271 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdkn2bP55271 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdkn2bP55271 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Cdkn2bP55271 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdkn2bP55271 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
Cdkn2bP55271 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Cdkn2bP55271 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Cdkn2bP55271 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Cdkn2bP55271 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Cdkn2bP55271 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cdkn2bP55271 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Cdkn2bP55271 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Cdkn2bP55271 Gm11336-201ENSMUST00000118168 334 ntBASIC15.52■□□□□ 0.08
Cdkn2bP55271 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Cdkn2bP55271 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Cdkn2bP55271 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Cdkn2bP55271 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC15.52■□□□□ 0.08
Cdkn2bP55271 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cdkn2bP55271 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Cdkn2bP55271 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cdkn2bP55271 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cdkn2bP55271 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cdkn2bP55271 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cdkn2bP55271 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 83.9 ms