Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC17.04■□□□□ 0.32
NcanP55066 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC17.04■□□□□ 0.32
NcanP55066 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC17.04■□□□□ 0.32
NcanP55066 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NcanP55066 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NcanP55066 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NcanP55066 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NcanP55066 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
NcanP55066 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NcanP55066 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
NcanP55066 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NcanP55066 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
NcanP55066 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
NcanP55066 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NcanP55066 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NcanP55066 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NcanP55066 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
NcanP55066 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NcanP55066 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NcanP55066 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC17.03■□□□□ 0.32
NcanP55066 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC17.03■□□□□ 0.32
NcanP55066 Mir7036b-201ENSMUST00000184791 63 ntBASIC17.03■□□□□ 0.32
NcanP55066 Mir6420-201ENSMUST00000185032 102 ntBASIC17.03■□□□□ 0.32
NcanP55066 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NcanP55066 AC140397.2-201ENSMUST00000224213 834 ntBASIC17.03■□□□□ 0.32
NcanP55066 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NcanP55066 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NcanP55066 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NcanP55066 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NcanP55066 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
NcanP55066 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.03■□□□□ 0.32
NcanP55066 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NcanP55066 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
NcanP55066 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NcanP55066 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
NcanP55066 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NcanP55066 Gm42934-201ENSMUST00000196920 1345 ntBASIC17.02■□□□□ 0.32
NcanP55066 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NcanP55066 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NcanP55066 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
NcanP55066 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
NcanP55066 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NcanP55066 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
NcanP55066 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
NcanP55066 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC17.02■□□□□ 0.32
NcanP55066 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
NcanP55066 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NcanP55066 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC17.02■□□□□ 0.32
NcanP55066 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC17.02■□□□□ 0.32
NcanP55066 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC17.02■□□□□ 0.32
NcanP55066 Gm18889-201ENSMUST00000174284 929 ntBASIC17.02■□□□□ 0.32
NcanP55066 Gm27622-201ENSMUST00000183779 60 ntBASIC17.02■□□□□ 0.32
NcanP55066 Gm9682-201ENSMUST00000197505 556 ntBASIC17.02■□□□□ 0.32
NcanP55066 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC17.02■□□□□ 0.32
NcanP55066 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC17.02■□□□□ 0.32
NcanP55066 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
NcanP55066 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
NcanP55066 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NcanP55066 Gm25857-201ENSMUST00000082788 129 ntBASIC17.02■□□□□ 0.32
NcanP55066 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
NcanP55066 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
NcanP55066 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
NcanP55066 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NcanP55066 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
NcanP55066 Gm38318-201ENSMUST00000195769 1706 ntBASIC17.01■□□□□ 0.31
NcanP55066 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
NcanP55066 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NcanP55066 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NcanP55066 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
NcanP55066 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NcanP55066 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
NcanP55066 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC17.01■□□□□ 0.31
NcanP55066 Gm43125-201ENSMUST00000201724 730 ntBASIC17.01■□□□□ 0.31
NcanP55066 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NcanP55066 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NcanP55066 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
NcanP55066 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
NcanP55066 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NcanP55066 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC17.01■□□□□ 0.31
NcanP55066 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NcanP55066 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NcanP55066 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NcanP55066 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
NcanP55066 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
NcanP55066 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
NcanP55066 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NcanP55066 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC17■□□□□ 0.31
NcanP55066 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC17■□□□□ 0.31
NcanP55066 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC17■□□□□ 0.31
NcanP55066 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
NcanP55066 Mir1938-201ENSMUST00000158746 100 ntBASIC17■□□□□ 0.31
NcanP55066 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC17■□□□□ 0.31
NcanP55066 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC17■□□□□ 0.31
NcanP55066 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC17■□□□□ 0.31
NcanP55066 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC17■□□□□ 0.31
NcanP55066 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NcanP55066 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NcanP55066 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NcanP55066 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC17■□□□□ 0.31
NcanP55066 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms