Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Pdx1P52946 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.05■□□□□ 0.16
Pdx1P52946 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pdx1P52946 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Pdx1P52946 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Pdx1P52946 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pdx1P52946 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pdx1P52946 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pdx1P52946 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pdx1P52946 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pdx1P52946 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pdx1P52946 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pdx1P52946 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Pdx1P52946 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pdx1P52946 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pdx1P52946 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pdx1P52946 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pdx1P52946 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pdx1P52946 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pdx1P52946 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pdx1P52946 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Pdx1P52946 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pdx1P52946 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pdx1P52946 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pdx1P52946 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.04■□□□□ 0.16
Pdx1P52946 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.04■□□□□ 0.16
Pdx1P52946 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pdx1P52946 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pdx1P52946 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC16.03■□□□□ 0.16
Pdx1P52946 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.03■□□□□ 0.16
Pdx1P52946 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Pdx1P52946 Gm32996-201ENSMUST00000199828 1447 ntBASIC16.03■□□□□ 0.16
Pdx1P52946 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pdx1P52946 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pdx1P52946 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pdx1P52946 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pdx1P52946 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pdx1P52946 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pdx1P52946 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Pdx1P52946 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pdx1P52946 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pdx1P52946 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pdx1P52946 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pdx1P52946 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
Pdx1P52946 Gm27742-201ENSMUST00000184667 60 ntBASIC16.03■□□□□ 0.16
Pdx1P52946 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
Pdx1P52946 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pdx1P52946 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pdx1P52946 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pdx1P52946 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pdx1P52946 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pdx1P52946 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pdx1P52946 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pdx1P52946 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pdx1P52946 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Pdx1P52946 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Pdx1P52946 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pdx1P52946 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pdx1P52946 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Pdx1P52946 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Pdx1P52946 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pdx1P52946 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC16.02■□□□□ 0.16
Pdx1P52946 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pdx1P52946 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC16.02■□□□□ 0.16
Pdx1P52946 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Pdx1P52946 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC16.02■□□□□ 0.16
Pdx1P52946 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC16.02■□□□□ 0.16
Pdx1P52946 Ighv6-1-201ENSMUST00000193612 343 ntBASIC16.02■□□□□ 0.16
Pdx1P52946 CT009713.7-201ENSMUST00000224689 571 ntBASIC16.02■□□□□ 0.16
Pdx1P52946 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Pdx1P52946 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pdx1P52946 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pdx1P52946 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pdx1P52946 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pdx1P52946 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pdx1P52946 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pdx1P52946 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pdx1P52946 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pdx1P52946 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Pdx1P52946 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Pdx1P52946 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pdx1P52946 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pdx1P52946 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pdx1P52946 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pdx1P52946 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pdx1P52946 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pdx1P52946 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pdx1P52946 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pdx1P52946 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC16.01■□□□□ 0.15
Pdx1P52946 AC130671.1-201ENSMUST00000227384 1237 ntBASIC16.01■□□□□ 0.15
Pdx1P52946 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pdx1P52946 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pdx1P52946 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pdx1P52946 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.01■□□□□ 0.15
Pdx1P52946 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pdx1P52946 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pdx1P52946 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pdx1P52946 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
Pdx1P52946 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Pdx1P52946 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms