Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx2-1P50220 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx2-1P50220 Sybu-209ENSMUST00000228639 4113 ntBASIC13.49□□□□□ -0.25
Nkx2-1P50220 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.49□□□□□ -0.25
Nkx2-1P50220 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx2-1P50220 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-1P50220 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-1P50220 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Nkx2-1P50220 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-1P50220 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC13.48□□□□□ -0.25
Nkx2-1P50220 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-1P50220 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-1P50220 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC13.48□□□□□ -0.25
Nkx2-1P50220 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Nkx2-1P50220 Gm27275-201ENSMUST00000184318 272 ntBASIC13.48□□□□□ -0.25
Nkx2-1P50220 Gm9694-201ENSMUST00000193347 1189 ntBASIC13.48□□□□□ -0.25
Nkx2-1P50220 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-1P50220 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-1P50220 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-1P50220 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-1P50220 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC13.48□□□□□ -0.25
Nkx2-1P50220 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-1P50220 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-1P50220 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-1P50220 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
Nkx2-1P50220 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-1P50220 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-1P50220 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-1P50220 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-1P50220 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-1P50220 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-1P50220 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-1P50220 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-1P50220 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-1P50220 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-1P50220 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-1P50220 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC13.47□□□□□ -0.25
Nkx2-1P50220 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-1P50220 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-1P50220 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-1P50220 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-1P50220 Gm12382-201ENSMUST00000122005 922 ntBASIC13.47□□□□□ -0.25
Nkx2-1P50220 Gm27000-201ENSMUST00000182943 842 ntBASIC13.47□□□□□ -0.25
Nkx2-1P50220 Trmt13-210ENSMUST00000198454 880 ntBASIC13.47□□□□□ -0.25
Nkx2-1P50220 Gm42545-201ENSMUST00000202755 922 ntBASIC13.47□□□□□ -0.25
Nkx2-1P50220 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Nkx2-1P50220 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-1P50220 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-1P50220 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC13.47□□□□□ -0.25
Nkx2-1P50220 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-1P50220 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-1P50220 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-1P50220 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-1P50220 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-1P50220 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-1P50220 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-1P50220 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-1P50220 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Nkx2-1P50220 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nkx2-1P50220 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
Nkx2-1P50220 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx2-1P50220 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx2-1P50220 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Nkx2-1P50220 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx2-1P50220 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx2-1P50220 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Nkx2-1P50220 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC13.46□□□□□ -0.25
Nkx2-1P50220 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
Nkx2-1P50220 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Nkx2-1P50220 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Nkx2-1P50220 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC13.46□□□□□ -0.26
Nkx2-1P50220 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Nkx2-1P50220 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Nkx2-1P50220 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Nkx2-1P50220 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Nkx2-1P50220 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC13.46□□□□□ -0.26
Nkx2-1P50220 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Nkx2-1P50220 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Nkx2-1P50220 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Nkx2-1P50220 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC13.45□□□□□ -0.26
Nkx2-1P50220 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx2-1P50220 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx2-1P50220 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx2-1P50220 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx2-1P50220 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx2-1P50220 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC13.45□□□□□ -0.26
Nkx2-1P50220 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
Nkx2-1P50220 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx2-1P50220 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx2-1P50220 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Nkx2-1P50220 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx2-1P50220 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx2-1P50220 Gm12527-201ENSMUST00000117967 564 ntBASIC13.45□□□□□ -0.26
Nkx2-1P50220 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC13.45□□□□□ -0.26
Nkx2-1P50220 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx2-1P50220 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx2-1P50220 Gm37856-201ENSMUST00000191634 999 ntBASIC13.45□□□□□ -0.26
Nkx2-1P50220 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Nkx2-1P50220 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC13.45□□□□□ -0.26
Nkx2-1P50220 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms