Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC14.67□□□□□ -0.06
Rfx3P48381 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rfx3P48381 Gm9484-201ENSMUST00000195892 1159 ntBASIC14.67□□□□□ -0.06
Rfx3P48381 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC14.67□□□□□ -0.06
Rfx3P48381 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Rfx3P48381 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rfx3P48381 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rfx3P48381 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rfx3P48381 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rfx3P48381 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC14.67□□□□□ -0.06
Rfx3P48381 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rfx3P48381 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rfx3P48381 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rfx3P48381 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC14.67□□□□□ -0.06
Rfx3P48381 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rfx3P48381 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rfx3P48381 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Rfx3P48381 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rfx3P48381 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rfx3P48381 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rfx3P48381 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rfx3P48381 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rfx3P48381 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rfx3P48381 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rfx3P48381 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC14.66□□□□□ -0.06
Rfx3P48381 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rfx3P48381 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rfx3P48381 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rfx3P48381 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rfx3P48381 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rfx3P48381 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rfx3P48381 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rfx3P48381 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rfx3P48381 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rfx3P48381 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.66□□□□□ -0.06
Rfx3P48381 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Rfx3P48381 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rfx3P48381 Gm13474-201ENSMUST00000122466 815 ntBASIC14.66□□□□□ -0.06
Rfx3P48381 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC14.66□□□□□ -0.06
Rfx3P48381 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC14.66□□□□□ -0.06
Rfx3P48381 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rfx3P48381 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Rfx3P48381 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rfx3P48381 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Rfx3P48381 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Rfx3P48381 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rfx3P48381 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
Rfx3P48381 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Rfx3P48381 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rfx3P48381 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.66□□□□□ -0.06
Rfx3P48381 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rfx3P48381 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rfx3P48381 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rfx3P48381 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Rfx3P48381 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Rfx3P48381 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rfx3P48381 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rfx3P48381 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rfx3P48381 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rfx3P48381 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Rfx3P48381 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rfx3P48381 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rfx3P48381 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rfx3P48381 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rfx3P48381 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Rfx3P48381 Gm20472-201ENSMUST00000174403 1240 ntBASIC14.65□□□□□ -0.06
Rfx3P48381 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC14.65□□□□□ -0.06
Rfx3P48381 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rfx3P48381 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rfx3P48381 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rfx3P48381 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Rfx3P48381 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rfx3P48381 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rfx3P48381 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC14.64□□□□□ -0.07
Rfx3P48381 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Rfx3P48381 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rfx3P48381 Gm45203-201ENSMUST00000206384 1831 ntBASIC14.64□□□□□ -0.07
Rfx3P48381 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rfx3P48381 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rfx3P48381 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.64□□□□□ -0.07
Rfx3P48381 Gm16061-201ENSMUST00000122167 857 ntBASIC14.64□□□□□ -0.07
Rfx3P48381 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Rfx3P48381 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Rfx3P48381 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rfx3P48381 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rfx3P48381 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rfx3P48381 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rfx3P48381 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rfx3P48381 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC14.64□□□□□ -0.07
Rfx3P48381 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rfx3P48381 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rfx3P48381 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rfx3P48381 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Rfx3P48381 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Rfx3P48381 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Rfx3P48381 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Rfx3P48381 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rfx3P48381 Gm6190-201ENSMUST00000220683 1374 ntBASIC14.63□□□□□ -0.07
Rfx3P48381 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Rfx3P48381 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms