Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC15.29■□□□□ 0.04
Nkx2-6P43688 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC15.29■□□□□ 0.04
Nkx2-6P43688 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC15.29■□□□□ 0.04
Nkx2-6P43688 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx2-6P43688 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx2-6P43688 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC15.29■□□□□ 0.04
Nkx2-6P43688 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx2-6P43688 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx2-6P43688 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx2-6P43688 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Nkx2-6P43688 Gm11841-201ENSMUST00000117060 1963 ntBASIC15.29■□□□□ 0.04
Nkx2-6P43688 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx2-6P43688 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx2-6P43688 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx2-6P43688 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Nkx2-6P43688 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx2-6P43688 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Nkx2-6P43688 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nkx2-6P43688 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx2-6P43688 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
Nkx2-6P43688 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx2-6P43688 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx2-6P43688 Dancr-204ENSMUST00000132389 2347 ntBASIC15.28■□□□□ 0.04
Nkx2-6P43688 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Nkx2-6P43688 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx2-6P43688 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx2-6P43688 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Nkx2-6P43688 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx2-6P43688 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx2-6P43688 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx2-6P43688 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx2-6P43688 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Nkx2-6P43688 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx2-6P43688 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx2-6P43688 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx2-6P43688 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx2-6P43688 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx2-6P43688 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Nkx2-6P43688 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx2-6P43688 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx2-6P43688 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Nkx2-6P43688 Gm11620-201ENSMUST00000118770 1845 ntBASIC15.28■□□□□ 0.04
Nkx2-6P43688 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx2-6P43688 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx2-6P43688 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx2-6P43688 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx2-6P43688 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx2-6P43688 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx2-6P43688 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nkx2-6P43688 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nkx2-6P43688 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nkx2-6P43688 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Nkx2-6P43688 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nkx2-6P43688 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nkx2-6P43688 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC15.27■□□□□ 0.04
Nkx2-6P43688 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nkx2-6P43688 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Nkx2-6P43688 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Nkx2-6P43688 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Nkx2-6P43688 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nkx2-6P43688 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Nkx2-6P43688 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC15.27■□□□□ 0.04
Nkx2-6P43688 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nkx2-6P43688 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Nkx2-6P43688 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC15.27■□□□□ 0.04
Nkx2-6P43688 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC15.27■□□□□ 0.04
Nkx2-6P43688 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nkx2-6P43688 Gm10060-201ENSMUST00000212002 111 ntBASIC15.27■□□□□ 0.04
Nkx2-6P43688 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nkx2-6P43688 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Nkx2-6P43688 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nkx2-6P43688 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nkx2-6P43688 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nkx2-6P43688 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Nkx2-6P43688 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Nkx2-6P43688 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nkx2-6P43688 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Nkx2-6P43688 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC15.27■□□□□ 0.03
Nkx2-6P43688 Gm26917-202ENSMUST00000192833 3329 ntBASIC15.27■□□□□ 0.03
Nkx2-6P43688 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nkx2-6P43688 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx2-6P43688 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx2-6P43688 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Nkx2-6P43688 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx2-6P43688 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx2-6P43688 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx2-6P43688 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx2-6P43688 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx2-6P43688 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx2-6P43688 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx2-6P43688 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx2-6P43688 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx2-6P43688 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx2-6P43688 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC15.26■□□□□ 0.03
Nkx2-6P43688 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx2-6P43688 Gm9889-202ENSMUST00000206983 1577 ntBASIC15.26■□□□□ 0.03
Nkx2-6P43688 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx2-6P43688 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx2-6P43688 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx2-6P43688 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms