Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfsf4P43488 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfsf4P43488 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
Tnfsf4P43488 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC15.66■□□□□ 0.1
Tnfsf4P43488 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC15.66■□□□□ 0.1
Tnfsf4P43488 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfsf4P43488 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC15.66■□□□□ 0.1
Tnfsf4P43488 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Tnfsf4P43488 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfsf4P43488 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfsf4P43488 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfsf4P43488 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC15.66■□□□□ 0.1
Tnfsf4P43488 Ntrk2-205ENSMUST00000224402 2284 ntBASIC15.66■□□□□ 0.1
Tnfsf4P43488 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfsf4P43488 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfsf4P43488 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfsf4P43488 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfsf4P43488 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfsf4P43488 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfsf4P43488 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfsf4P43488 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfsf4P43488 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Tnfsf4P43488 Spsb2-203ENSMUST00000112473 1322 ntBASIC15.66■□□□□ 0.1
Tnfsf4P43488 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfsf4P43488 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfsf4P43488 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Tnfsf4P43488 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Tnfsf4P43488 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tnfsf4P43488 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tnfsf4P43488 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Tnfsf4P43488 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tnfsf4P43488 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC15.65■□□□□ 0.1
Tnfsf4P43488 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Tnfsf4P43488 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tnfsf4P43488 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Tnfsf4P43488 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tnfsf4P43488 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Tnfsf4P43488 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC15.65■□□□□ 0.1
Tnfsf4P43488 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Tnfsf4P43488 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC15.65■□□□□ 0.1
Tnfsf4P43488 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tnfsf4P43488 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tnfsf4P43488 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Tnfsf4P43488 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tnfsf4P43488 Gm5417-201ENSMUST00000079706 384 ntBASIC15.65■□□□□ 0.1
Tnfsf4P43488 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tnfsf4P43488 Prob1-201ENSMUST00000097619 3021 ntBASIC15.65■□□□□ 0.1
Tnfsf4P43488 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tnfsf4P43488 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tnfsf4P43488 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tnfsf4P43488 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tnfsf4P43488 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Tnfsf4P43488 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tnfsf4P43488 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Tnfsf4P43488 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tnfsf4P43488 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC15.65■□□□□ 0.1
Tnfsf4P43488 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Tnfsf4P43488 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Tnfsf4P43488 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
Tnfsf4P43488 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tnfsf4P43488 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC15.64■□□□□ 0.09
Tnfsf4P43488 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tnfsf4P43488 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Tnfsf4P43488 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tnfsf4P43488 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tnfsf4P43488 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tnfsf4P43488 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tnfsf4P43488 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Tnfsf4P43488 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Tnfsf4P43488 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Tnfsf4P43488 Gm16061-201ENSMUST00000122167 857 ntBASIC15.64■□□□□ 0.09
Tnfsf4P43488 Gm13474-201ENSMUST00000122466 815 ntBASIC15.64■□□□□ 0.09
Tnfsf4P43488 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Tnfsf4P43488 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Tnfsf4P43488 Gm2274-201ENSMUST00000184539 609 ntBASIC15.64■□□□□ 0.09
Tnfsf4P43488 Gm36967-201ENSMUST00000193814 266 ntBASIC15.64■□□□□ 0.09
Tnfsf4P43488 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Tnfsf4P43488 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC15.64■□□□□ 0.09
Tnfsf4P43488 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC15.64■□□□□ 0.09
Tnfsf4P43488 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tnfsf4P43488 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tnfsf4P43488 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tnfsf4P43488 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tnfsf4P43488 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tnfsf4P43488 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Tnfsf4P43488 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tnfsf4P43488 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tnfsf4P43488 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tnfsf4P43488 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tnfsf4P43488 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Tnfsf4P43488 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Tnfsf4P43488 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Tnfsf4P43488 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tnfsf4P43488 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Tnfsf4P43488 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tnfsf4P43488 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Tnfsf4P43488 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Tnfsf4P43488 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tnfsf4P43488 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tnfsf4P43488 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms