Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HttP42859 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HttP42859 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HttP42859 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC17.23■□□□□ 0.35
HttP42859 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HttP42859 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.23■□□□□ 0.35
HttP42859 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HttP42859 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HttP42859 Gm9682-201ENSMUST00000197505 556 ntBASIC17.23■□□□□ 0.35
HttP42859 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC17.23■□□□□ 0.35
HttP42859 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC17.23■□□□□ 0.35
HttP42859 Rbfox2-208ENSMUST00000227930 1218 ntBASIC17.23■□□□□ 0.35
HttP42859 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HttP42859 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
HttP42859 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
HttP42859 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
HttP42859 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC17.22■□□□□ 0.35
HttP42859 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HttP42859 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HttP42859 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC17.22■□□□□ 0.35
HttP42859 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HttP42859 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC17.22■□□□□ 0.35
HttP42859 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
HttP42859 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
HttP42859 Wnt10b-206ENSMUST00000228546 2709 ntBASIC17.22■□□□□ 0.35
HttP42859 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
HttP42859 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HttP42859 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
HttP42859 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.22■□□□□ 0.35
HttP42859 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HttP42859 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
HttP42859 Gm15653-201ENSMUST00000119247 907 ntBASIC17.22■□□□□ 0.35
HttP42859 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
HttP42859 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC17.22■□□□□ 0.35
HttP42859 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
HttP42859 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HttP42859 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HttP42859 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HttP42859 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HttP42859 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HttP42859 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HttP42859 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HttP42859 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
HttP42859 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HttP42859 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HttP42859 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.21■□□□□ 0.35
HttP42859 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC17.21■□□□□ 0.35
HttP42859 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HttP42859 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC17.21■□□□□ 0.35
HttP42859 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
HttP42859 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HttP42859 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HttP42859 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HttP42859 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HttP42859 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HttP42859 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HttP42859 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC17.21■□□□□ 0.35
HttP42859 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HttP42859 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HttP42859 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
HttP42859 Gm13453-201ENSMUST00000118708 357 ntBASIC17.21■□□□□ 0.34
HttP42859 Gm8344-201ENSMUST00000119813 856 ntBASIC17.21■□□□□ 0.34
HttP42859 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC17.21■□□□□ 0.34
HttP42859 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
HttP42859 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.34
HttP42859 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HttP42859 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HttP42859 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.2■□□□□ 0.34
HttP42859 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HttP42859 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
HttP42859 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC17.2■□□□□ 0.34
HttP42859 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HttP42859 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HttP42859 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HttP42859 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
HttP42859 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HttP42859 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC17.2■□□□□ 0.34
HttP42859 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
HttP42859 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HttP42859 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
HttP42859 Gm27430-201ENSMUST00000184585 107 ntBASIC17.2■□□□□ 0.34
HttP42859 Gm44333-201ENSMUST00000197168 107 ntBASIC17.2■□□□□ 0.34
HttP42859 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
HttP42859 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
HttP42859 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HttP42859 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HttP42859 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HttP42859 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HttP42859 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC17.19■□□□□ 0.34
HttP42859 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC17.19■□□□□ 0.34
HttP42859 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC17.19■□□□□ 0.34
HttP42859 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC17.19■□□□□ 0.34
HttP42859 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
HttP42859 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HttP42859 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HttP42859 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HttP42859 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HttP42859 Mir7085-201ENSMUST00000184353 66 ntBASIC17.19■□□□□ 0.34
HttP42859 Gm6473-201ENSMUST00000188572 1210 ntBASIC17.19■□□□□ 0.34
HttP42859 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms