Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Abca1P41233 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Abca1P41233 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC13.44□□□□□ -0.26
Abca1P41233 Gm44430-201ENSMUST00000203376 995 ntBASIC13.44□□□□□ -0.26
Abca1P41233 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Abca1P41233 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Abca1P41233 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Abca1P41233 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Abca1P41233 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Abca1P41233 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Abca1P41233 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Abca1P41233 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Abca1P41233 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Abca1P41233 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Abca1P41233 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Abca1P41233 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Abca1P41233 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Abca1P41233 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Abca1P41233 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Abca1P41233 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Abca1P41233 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Abca1P41233 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC13.44□□□□□ -0.26
Abca1P41233 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Abca1P41233 Gm43338-201ENSMUST00000198617 2223 ntBASIC13.44□□□□□ -0.26
Abca1P41233 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Abca1P41233 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Abca1P41233 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Abca1P41233 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Abca1P41233 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Abca1P41233 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC13.44□□□□□ -0.26
Abca1P41233 Gm2756-201ENSMUST00000195851 400 ntBASIC13.44□□□□□ -0.26
Abca1P41233 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC13.44□□□□□ -0.26
Abca1P41233 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Abca1P41233 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Abca1P41233 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Abca1P41233 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC13.44□□□□□ -0.26
Abca1P41233 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Abca1P41233 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Abca1P41233 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Abca1P41233 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Abca1P41233 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Abca1P41233 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Abca1P41233 Gm15467-201ENSMUST00000120582 445 ntBASIC13.43□□□□□ -0.26
Abca1P41233 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC13.43□□□□□ -0.26
Abca1P41233 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Abca1P41233 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC13.43□□□□□ -0.26
Abca1P41233 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Abca1P41233 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Abca1P41233 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Abca1P41233 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Abca1P41233 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Abca1P41233 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Abca1P41233 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Abca1P41233 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Abca1P41233 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Abca1P41233 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Abca1P41233 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Abca1P41233 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC13.43□□□□□ -0.26
Abca1P41233 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Abca1P41233 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC13.43□□□□□ -0.26
Abca1P41233 Gm42900-201ENSMUST00000197184 2167 ntBASIC13.43□□□□□ -0.26
Abca1P41233 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Abca1P41233 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Abca1P41233 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Abca1P41233 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Abca1P41233 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Abca1P41233 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Abca1P41233 Gm32996-201ENSMUST00000199828 1447 ntBASIC13.43□□□□□ -0.26
Abca1P41233 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Abca1P41233 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Abca1P41233 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Abca1P41233 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC13.43□□□□□ -0.26
Abca1P41233 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC13.43□□□□□ -0.26
Abca1P41233 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Abca1P41233 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Abca1P41233 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Abca1P41233 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Abca1P41233 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Abca1P41233 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Abca1P41233 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Abca1P41233 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC13.43□□□□□ -0.26
Abca1P41233 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Abca1P41233 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Abca1P41233 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
Abca1P41233 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Abca1P41233 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Abca1P41233 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Abca1P41233 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC13.42□□□□□ -0.26
Abca1P41233 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Abca1P41233 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC13.42□□□□□ -0.26
Abca1P41233 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Abca1P41233 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC13.42□□□□□ -0.26
Abca1P41233 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Abca1P41233 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Abca1P41233 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Abca1P41233 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Abca1P41233 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Abca1P41233 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Abca1P41233 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Abca1P41233 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms