Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox6P40645 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox6P40645 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Sox6P40645 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox6P40645 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox6P40645 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox6P40645 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Sox6P40645 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox6P40645 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox6P40645 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sox6P40645 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Sox6P40645 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox6P40645 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Sox6P40645 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox6P40645 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox6P40645 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC15.24■□□□□ 0.03
Sox6P40645 Gm2274-201ENSMUST00000184539 609 ntBASIC15.24■□□□□ 0.03
Sox6P40645 Gm19430-201ENSMUST00000193847 2137 ntBASIC15.24■□□□□ 0.03
Sox6P40645 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Sox6P40645 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox6P40645 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox6P40645 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox6P40645 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Sox6P40645 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC15.24■□□□□ 0.03
Sox6P40645 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox6P40645 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox6P40645 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Sox6P40645 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox6P40645 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox6P40645 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox6P40645 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox6P40645 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox6P40645 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox6P40645 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox6P40645 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Sox6P40645 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Sox6P40645 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sox6P40645 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox6P40645 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox6P40645 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Sox6P40645 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox6P40645 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox6P40645 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox6P40645 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Sox6P40645 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox6P40645 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox6P40645 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox6P40645 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Sox6P40645 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox6P40645 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC15.23■□□□□ 0.03
Sox6P40645 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC15.23■□□□□ 0.03
Sox6P40645 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Sox6P40645 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Sox6P40645 Gm18958-201ENSMUST00000174258 762 ntBASIC15.23■□□□□ 0.03
Sox6P40645 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Sox6P40645 Gm43799-201ENSMUST00000201845 579 ntBASIC15.23■□□□□ 0.03
Sox6P40645 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Sox6P40645 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Sox6P40645 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC15.23■□□□□ 0.03
Sox6P40645 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox6P40645 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC15.23■□□□□ 0.03
Sox6P40645 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Sox6P40645 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox6P40645 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox6P40645 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Sox6P40645 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox6P40645 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox6P40645 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox6P40645 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sox6P40645 AC133083.1-201ENSMUST00000221736 2209 ntBASIC15.23■□□□□ 0.03
Sox6P40645 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Sox6P40645 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC15.22■□□□□ 0.03
Sox6P40645 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sox6P40645 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sox6P40645 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sox6P40645 Tfap2a-209ENSMUST00000225180 1828 ntBASIC15.22■□□□□ 0.03
Sox6P40645 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC15.22■□□□□ 0.03
Sox6P40645 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sox6P40645 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Sox6P40645 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sox6P40645 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sox6P40645 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC15.22■□□□□ 0.03
Sox6P40645 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Sox6P40645 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sox6P40645 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sox6P40645 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC15.22■□□□□ 0.03
Sox6P40645 Gm13559-201ENSMUST00000120476 863 ntBASIC15.22■□□□□ 0.03
Sox6P40645 Krtap5-1-202ENSMUST00000188274 742 ntBASIC15.22■□□□□ 0.03
Sox6P40645 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Sox6P40645 AC153881.2-201ENSMUST00000214877 204 ntBASIC15.22■□□□□ 0.03
Sox6P40645 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sox6P40645 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sox6P40645 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sox6P40645 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sox6P40645 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC15.22■□□□□ 0.03
Sox6P40645 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sox6P40645 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sox6P40645 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sox6P40645 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sox6P40645 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms