Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Upk2P38575 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC14.24□□□□□ -0.13
Upk2P38575 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Upk2P38575 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Upk2P38575 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Upk2P38575 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
Upk2P38575 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Upk2P38575 Gm10052-201ENSMUST00000168019 960 ntBASIC14.24□□□□□ -0.13
Upk2P38575 Gm44430-201ENSMUST00000203376 995 ntBASIC14.24□□□□□ -0.13
Upk2P38575 Gm5587-201ENSMUST00000206270 674 ntBASIC14.24□□□□□ -0.13
Upk2P38575 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Upk2P38575 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Upk2P38575 Gm7729-201ENSMUST00000050143 801 ntBASIC14.24□□□□□ -0.13
Upk2P38575 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Upk2P38575 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Upk2P38575 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Upk2P38575 Zkscan4-202ENSMUST00000225845 1506 ntBASIC14.24□□□□□ -0.13
Upk2P38575 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Upk2P38575 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Upk2P38575 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Upk2P38575 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Upk2P38575 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Upk2P38575 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC14.23□□□□□ -0.13
Upk2P38575 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Upk2P38575 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Upk2P38575 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Upk2P38575 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Upk2P38575 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
Upk2P38575 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
Upk2P38575 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC14.23□□□□□ -0.13
Upk2P38575 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Upk2P38575 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Upk2P38575 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Upk2P38575 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Upk2P38575 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Upk2P38575 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Upk2P38575 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Upk2P38575 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Upk2P38575 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Upk2P38575 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Upk2P38575 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Upk2P38575 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Upk2P38575 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Upk2P38575 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Upk2P38575 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Upk2P38575 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Upk2P38575 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Upk2P38575 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Upk2P38575 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Upk2P38575 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Upk2P38575 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Upk2P38575 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Upk2P38575 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Upk2P38575 Gm6623-201ENSMUST00000173570 544 ntBASIC14.22□□□□□ -0.13
Upk2P38575 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Upk2P38575 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Upk2P38575 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Upk2P38575 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Upk2P38575 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Upk2P38575 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Upk2P38575 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Upk2P38575 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Upk2P38575 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Upk2P38575 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Upk2P38575 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Upk2P38575 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Upk2P38575 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Upk2P38575 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Upk2P38575 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Upk2P38575 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Upk2P38575 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.22□□□□□ -0.13
Upk2P38575 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14.21□□□□□ -0.13
Upk2P38575 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Upk2P38575 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Upk2P38575 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Upk2P38575 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Upk2P38575 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Upk2P38575 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Upk2P38575 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Upk2P38575 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Upk2P38575 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC14.21□□□□□ -0.13
Upk2P38575 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Upk2P38575 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Upk2P38575 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Upk2P38575 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Upk2P38575 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Upk2P38575 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Upk2P38575 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Upk2P38575 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Upk2P38575 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Upk2P38575 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Upk2P38575 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Upk2P38575 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Upk2P38575 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Upk2P38575 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Upk2P38575 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Upk2P38575 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Upk2P38575 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Upk2P38575 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Upk2P38575 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms