Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LdlrP35951 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LdlrP35951 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LdlrP35951 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LdlrP35951 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LdlrP35951 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LdlrP35951 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LdlrP35951 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LdlrP35951 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LdlrP35951 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LdlrP35951 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LdlrP35951 Mir5130-201ENSMUST00000175160 84 ntBASIC16.14■□□□□ 0.17
LdlrP35951 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
LdlrP35951 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC16.14■□□□□ 0.17
LdlrP35951 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.14■□□□□ 0.17
LdlrP35951 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LdlrP35951 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LdlrP35951 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
LdlrP35951 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
LdlrP35951 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
LdlrP35951 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
LdlrP35951 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LdlrP35951 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LdlrP35951 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
LdlrP35951 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LdlrP35951 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
LdlrP35951 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
LdlrP35951 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LdlrP35951 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LdlrP35951 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
LdlrP35951 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.13■□□□□ 0.17
LdlrP35951 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
LdlrP35951 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
LdlrP35951 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LdlrP35951 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LdlrP35951 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
LdlrP35951 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
LdlrP35951 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LdlrP35951 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LdlrP35951 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LdlrP35951 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LdlrP35951 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC16.13■□□□□ 0.17
LdlrP35951 Gm2274-201ENSMUST00000184539 609 ntBASIC16.13■□□□□ 0.17
LdlrP35951 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.13■□□□□ 0.17
LdlrP35951 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LdlrP35951 AC159205.3-201ENSMUST00000224614 874 ntBASIC16.13■□□□□ 0.17
LdlrP35951 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
LdlrP35951 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
LdlrP35951 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LdlrP35951 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LdlrP35951 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LdlrP35951 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LdlrP35951 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LdlrP35951 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
LdlrP35951 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
LdlrP35951 Gm9867-201ENSMUST00000192212 2647 ntBASIC16.13■□□□□ 0.17
LdlrP35951 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LdlrP35951 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
LdlrP35951 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
LdlrP35951 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
LdlrP35951 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LdlrP35951 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LdlrP35951 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.12■□□□□ 0.17
LdlrP35951 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
LdlrP35951 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LdlrP35951 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LdlrP35951 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LdlrP35951 AC154855.1-201ENSMUST00000227353 1458 ntBASIC16.12■□□□□ 0.17
LdlrP35951 Gm44616-201ENSMUST00000206417 1732 ntBASIC16.12■□□□□ 0.17
LdlrP35951 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
LdlrP35951 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LdlrP35951 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.12■□□□□ 0.17
LdlrP35951 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LdlrP35951 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LdlrP35951 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC16.12■□□□□ 0.17
LdlrP35951 Gm18101-201ENSMUST00000215769 548 ntBASIC16.12■□□□□ 0.17
LdlrP35951 Gm7791-201ENSMUST00000219066 539 ntBASIC16.12■□□□□ 0.17
LdlrP35951 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LdlrP35951 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC16.12■□□□□ 0.17
LdlrP35951 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
LdlrP35951 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LdlrP35951 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
LdlrP35951 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
LdlrP35951 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LdlrP35951 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
LdlrP35951 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LdlrP35951 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LdlrP35951 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LdlrP35951 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LdlrP35951 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LdlrP35951 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LdlrP35951 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LdlrP35951 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LdlrP35951 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LdlrP35951 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.11■□□□□ 0.17
LdlrP35951 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LdlrP35951 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LdlrP35951 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
LdlrP35951 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LdlrP35951 Gm14859-201ENSMUST00000117752 357 ntBASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms