Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Slc6a1P31648 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Slc6a1P31648 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Slc6a1P31648 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC13.99□□□□□ -0.17
Slc6a1P31648 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Slc6a1P31648 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Slc6a1P31648 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Slc6a1P31648 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Slc6a1P31648 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Slc6a1P31648 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Slc6a1P31648 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Slc6a1P31648 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC13.98□□□□□ -0.17
Slc6a1P31648 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Slc6a1P31648 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Slc6a1P31648 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Slc6a1P31648 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Slc6a1P31648 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Slc6a1P31648 H2-K2-201ENSMUST00000174250 1049 ntBASIC13.98□□□□□ -0.17
Slc6a1P31648 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Slc6a1P31648 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC13.98□□□□□ -0.17
Slc6a1P31648 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Slc6a1P31648 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Slc6a1P31648 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Slc6a1P31648 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Slc6a1P31648 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Slc6a1P31648 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Slc6a1P31648 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Slc6a1P31648 Gm27528-202ENSMUST00000222916 2012 ntBASIC13.98□□□□□ -0.17
Slc6a1P31648 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Slc6a1P31648 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Slc6a1P31648 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC13.98□□□□□ -0.17
Slc6a1P31648 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Slc6a1P31648 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Slc6a1P31648 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Slc6a1P31648 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Slc6a1P31648 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Slc6a1P31648 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Slc6a1P31648 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Slc6a1P31648 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Slc6a1P31648 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Slc6a1P31648 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Slc6a1P31648 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Slc6a1P31648 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Slc6a1P31648 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Slc6a1P31648 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Slc6a1P31648 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC13.97□□□□□ -0.17
Slc6a1P31648 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Slc6a1P31648 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Slc6a1P31648 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Slc6a1P31648 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Slc6a1P31648 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
Slc6a1P31648 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC13.97□□□□□ -0.17
Slc6a1P31648 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Slc6a1P31648 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Slc6a1P31648 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Slc6a1P31648 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Slc6a1P31648 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Slc6a1P31648 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
Slc6a1P31648 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Slc6a1P31648 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Slc6a1P31648 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Slc6a1P31648 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Slc6a1P31648 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Slc6a1P31648 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Slc6a1P31648 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Slc6a1P31648 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Slc6a1P31648 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Slc6a1P31648 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Slc6a1P31648 AC163637.1-201ENSMUST00000215491 1894 ntBASIC13.96□□□□□ -0.17
Slc6a1P31648 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Slc6a1P31648 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Slc6a1P31648 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC13.96□□□□□ -0.17
Slc6a1P31648 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Slc6a1P31648 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Slc6a1P31648 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Slc6a1P31648 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Slc6a1P31648 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Slc6a1P31648 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC13.96□□□□□ -0.17
Slc6a1P31648 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Slc6a1P31648 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Slc6a1P31648 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC13.96□□□□□ -0.17
Slc6a1P31648 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC13.96□□□□□ -0.17
Slc6a1P31648 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Slc6a1P31648 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Slc6a1P31648 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Slc6a1P31648 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
Slc6a1P31648 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Slc6a1P31648 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC13.96□□□□□ -0.18
Slc6a1P31648 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Slc6a1P31648 App-207ENSMUST00000227737 2827 ntBASIC13.96□□□□□ -0.18
Slc6a1P31648 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Slc6a1P31648 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Slc6a1P31648 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Slc6a1P31648 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Slc6a1P31648 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Slc6a1P31648 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Slc6a1P31648 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Slc6a1P31648 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Slc6a1P31648 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Slc6a1P31648 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms