Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RxrbP28704 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RxrbP28704 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RxrbP28704 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
RxrbP28704 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RxrbP28704 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RxrbP28704 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
RxrbP28704 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RxrbP28704 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RxrbP28704 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RxrbP28704 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.29■□□□□ 0.2
RxrbP28704 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RxrbP28704 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC16.29■□□□□ 0.2
RxrbP28704 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RxrbP28704 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RxrbP28704 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RxrbP28704 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RxrbP28704 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RxrbP28704 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC16.29■□□□□ 0.2
RxrbP28704 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RxrbP28704 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RxrbP28704 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RxrbP28704 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RxrbP28704 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC16.29■□□□□ 0.2
RxrbP28704 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC16.29■□□□□ 0.2
RxrbP28704 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RxrbP28704 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.29■□□□□ 0.2
RxrbP28704 AC175538.1-201ENSMUST00000225343 1269 ntBASIC16.29■□□□□ 0.2
RxrbP28704 AC154649.1-201ENSMUST00000227392 384 ntBASIC16.29■□□□□ 0.2
RxrbP28704 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RxrbP28704 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RxrbP28704 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.29■□□□□ 0.2
RxrbP28704 Tfap2a-203ENSMUST00000223869 2037 ntBASIC16.29■□□□□ 0.2
RxrbP28704 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RxrbP28704 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RxrbP28704 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RxrbP28704 Gm43352-201ENSMUST00000196419 3065 ntBASIC16.29■□□□□ 0.2
RxrbP28704 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RxrbP28704 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RxrbP28704 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RxrbP28704 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
RxrbP28704 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RxrbP28704 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
RxrbP28704 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16.28■□□□□ 0.2
RxrbP28704 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RxrbP28704 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC16.28■□□□□ 0.2
RxrbP28704 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RxrbP28704 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC16.28■□□□□ 0.2
RxrbP28704 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
RxrbP28704 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RxrbP28704 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RxrbP28704 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
RxrbP28704 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RxrbP28704 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RxrbP28704 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
RxrbP28704 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RxrbP28704 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
RxrbP28704 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
RxrbP28704 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RxrbP28704 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RxrbP28704 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RxrbP28704 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RxrbP28704 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RxrbP28704 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RxrbP28704 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
RxrbP28704 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RxrbP28704 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RxrbP28704 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
RxrbP28704 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.27■□□□□ 0.2
RxrbP28704 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RxrbP28704 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RxrbP28704 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RxrbP28704 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RxrbP28704 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RxrbP28704 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RxrbP28704 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
RxrbP28704 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RxrbP28704 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RxrbP28704 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RxrbP28704 Gm13181-201ENSMUST00000120117 1069 ntBASIC16.27■□□□□ 0.2
RxrbP28704 Gm7638-201ENSMUST00000121348 967 ntBASIC16.27■□□□□ 0.2
RxrbP28704 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RxrbP28704 Gm8520-201ENSMUST00000186517 868 ntBASIC16.27■□□□□ 0.2
RxrbP28704 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC16.27■□□□□ 0.2
RxrbP28704 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.27■□□□□ 0.2
RxrbP28704 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RxrbP28704 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
RxrbP28704 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
RxrbP28704 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RxrbP28704 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
RxrbP28704 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RxrbP28704 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RxrbP28704 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
RxrbP28704 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RxrbP28704 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RxrbP28704 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RxrbP28704 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RxrbP28704 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RxrbP28704 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RxrbP28704 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms