Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Ccl6P27784 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl6P27784 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl6P27784 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl6P27784 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl6P27784 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl6P27784 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl6P27784 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl6P27784 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl6P27784 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl6P27784 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl6P27784 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Ccl6P27784 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Ccl6P27784 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl6P27784 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl6P27784 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl6P27784 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl6P27784 Mir1668-201ENSMUST00000184114 107 ntBASIC12.66□□□□□ -0.38
Ccl6P27784 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl6P27784 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC12.66□□□□□ -0.38
Ccl6P27784 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC12.66□□□□□ -0.38
Ccl6P27784 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl6P27784 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl6P27784 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl6P27784 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl6P27784 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl6P27784 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl6P27784 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl6P27784 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl6P27784 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl6P27784 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Ccl6P27784 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl6P27784 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl6P27784 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Ccl6P27784 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl6P27784 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl6P27784 Gm37166-201ENSMUST00000195473 2474 ntBASIC12.66□□□□□ -0.38
Ccl6P27784 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl6P27784 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl6P27784 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl6P27784 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl6P27784 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl6P27784 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl6P27784 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl6P27784 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl6P27784 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl6P27784 Cxcl14-202ENSMUST00000224801 1467 ntBASIC12.65□□□□□ -0.38
Ccl6P27784 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Ccl6P27784 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccl6P27784 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccl6P27784 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccl6P27784 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ccl6P27784 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ccl6P27784 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccl6P27784 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ccl6P27784 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC12.65□□□□□ -0.38
Ccl6P27784 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccl6P27784 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
Ccl6P27784 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccl6P27784 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC12.65□□□□□ -0.38
Ccl6P27784 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccl6P27784 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccl6P27784 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccl6P27784 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ccl6P27784 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC12.65□□□□□ -0.38
Ccl6P27784 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC12.65□□□□□ -0.38
Ccl6P27784 Gm27389-201ENSMUST00000183622 195 ntBASIC12.65□□□□□ -0.38
Ccl6P27784 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC12.65□□□□□ -0.38
Ccl6P27784 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccl6P27784 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccl6P27784 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccl6P27784 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccl6P27784 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccl6P27784 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC12.65□□□□□ -0.38
Ccl6P27784 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ccl6P27784 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Ccl6P27784 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ccl6P27784 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC12.65□□□□□ -0.38
Ccl6P27784 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccl6P27784 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ccl6P27784 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC12.65□□□□□ -0.38
Ccl6P27784 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Ccl6P27784 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccl6P27784 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccl6P27784 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccl6P27784 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Ccl6P27784 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Ccl6P27784 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Ccl6P27784 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ccl6P27784 Zfp264-201ENSMUST00000208656 1563 ntBASIC12.64□□□□□ -0.39
Ccl6P27784 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccl6P27784 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccl6P27784 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccl6P27784 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Ccl6P27784 Slc35b2-202ENSMUST00000223987 1766 ntBASIC12.64□□□□□ -0.39
Ccl6P27784 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Ccl6P27784 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Ccl6P27784 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccl6P27784 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ccl6P27784 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms