Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cd40P27512 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cd40P27512 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Cd40P27512 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC14.67□□□□□ -0.06
Cd40P27512 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cd40P27512 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cd40P27512 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cd40P27512 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC14.67□□□□□ -0.06
Cd40P27512 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Cd40P27512 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cd40P27512 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cd40P27512 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cd40P27512 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cd40P27512 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cd40P27512 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cd40P27512 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cd40P27512 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cd40P27512 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC14.67□□□□□ -0.06
Cd40P27512 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cd40P27512 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cd40P27512 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cd40P27512 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cd40P27512 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cd40P27512 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Cd40P27512 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cd40P27512 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cd40P27512 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cd40P27512 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cd40P27512 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cd40P27512 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC14.66□□□□□ -0.06
Cd40P27512 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cd40P27512 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Cd40P27512 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cd40P27512 Gm14859-201ENSMUST00000117752 357 ntBASIC14.66□□□□□ -0.06
Cd40P27512 Gm13312-201ENSMUST00000119631 718 ntBASIC14.66□□□□□ -0.06
Cd40P27512 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC14.66□□□□□ -0.06
Cd40P27512 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC14.66□□□□□ -0.06
Cd40P27512 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cd40P27512 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cd40P27512 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cd40P27512 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Cd40P27512 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cd40P27512 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Cd40P27512 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cd40P27512 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cd40P27512 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cd40P27512 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cd40P27512 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cd40P27512 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cd40P27512 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cd40P27512 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cd40P27512 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cd40P27512 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cd40P27512 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cd40P27512 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cd40P27512 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Cd40P27512 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cd40P27512 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cd40P27512 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Cd40P27512 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Cd40P27512 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cd40P27512 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cd40P27512 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cd40P27512 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cd40P27512 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cd40P27512 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cd40P27512 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.65□□□□□ -0.06
Cd40P27512 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cd40P27512 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cd40P27512 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC14.65□□□□□ -0.07
Cd40P27512 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Cd40P27512 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Cd40P27512 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC14.64□□□□□ -0.07
Cd40P27512 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC14.64□□□□□ -0.07
Cd40P27512 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cd40P27512 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC14.64□□□□□ -0.07
Cd40P27512 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC14.64□□□□□ -0.07
Cd40P27512 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cd40P27512 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
Cd40P27512 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC14.64□□□□□ -0.07
Cd40P27512 Olfr129-201ENSMUST00000122318 993 ntBASIC14.64□□□□□ -0.07
Cd40P27512 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cd40P27512 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC14.64□□□□□ -0.07
Cd40P27512 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC14.64□□□□□ -0.07
Cd40P27512 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cd40P27512 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cd40P27512 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
Cd40P27512 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cd40P27512 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
Cd40P27512 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cd40P27512 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cd40P27512 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cd40P27512 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cd40P27512 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Cd40P27512 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC14.63□□□□□ -0.07
Cd40P27512 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cd40P27512 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cd40P27512 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cd40P27512 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cd40P27512 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms