Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC17.65■□□□□ 0.42
Pde6bP23440 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.65■□□□□ 0.42
Pde6bP23440 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pde6bP23440 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Pde6bP23440 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pde6bP23440 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pde6bP23440 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Pde6bP23440 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Pde6bP23440 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Pde6bP23440 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Pde6bP23440 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.64■□□□□ 0.42
Pde6bP23440 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Pde6bP23440 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pde6bP23440 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pde6bP23440 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pde6bP23440 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pde6bP23440 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pde6bP23440 Gm15442-201ENSMUST00000117905 1527 ntBASIC17.64■□□□□ 0.41
Pde6bP23440 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pde6bP23440 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC17.64■□□□□ 0.41
Pde6bP23440 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pde6bP23440 Gm18206-201ENSMUST00000207027 926 ntBASIC17.64■□□□□ 0.41
Pde6bP23440 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC17.64■□□□□ 0.41
Pde6bP23440 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pde6bP23440 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pde6bP23440 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pde6bP23440 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pde6bP23440 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pde6bP23440 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pde6bP23440 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.64■□□□□ 0.41
Pde6bP23440 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pde6bP23440 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pde6bP23440 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pde6bP23440 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pde6bP23440 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pde6bP23440 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pde6bP23440 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Pde6bP23440 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pde6bP23440 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pde6bP23440 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pde6bP23440 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pde6bP23440 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC17.63■□□□□ 0.41
Pde6bP23440 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC17.63■□□□□ 0.41
Pde6bP23440 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC17.63■□□□□ 0.41
Pde6bP23440 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC17.63■□□□□ 0.41
Pde6bP23440 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pde6bP23440 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pde6bP23440 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.63■□□□□ 0.41
Pde6bP23440 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pde6bP23440 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pde6bP23440 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
Pde6bP23440 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Pde6bP23440 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pde6bP23440 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pde6bP23440 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pde6bP23440 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pde6bP23440 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pde6bP23440 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pde6bP23440 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pde6bP23440 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pde6bP23440 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pde6bP23440 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Pde6bP23440 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pde6bP23440 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.62■□□□□ 0.41
Pde6bP23440 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pde6bP23440 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pde6bP23440 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC17.62■□□□□ 0.41
Pde6bP23440 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC17.62■□□□□ 0.41
Pde6bP23440 AC114585.2-202ENSMUST00000228094 426 ntBASIC17.62■□□□□ 0.41
Pde6bP23440 Gm5867-201ENSMUST00000063197 592 ntBASIC17.62■□□□□ 0.41
Pde6bP23440 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pde6bP23440 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pde6bP23440 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pde6bP23440 Gm18856-201ENSMUST00000178096 1374 ntBASIC17.62■□□□□ 0.41
Pde6bP23440 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pde6bP23440 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC17.61■□□□□ 0.41
Pde6bP23440 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pde6bP23440 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pde6bP23440 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pde6bP23440 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
Pde6bP23440 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pde6bP23440 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pde6bP23440 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Pde6bP23440 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Pde6bP23440 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC17.61■□□□□ 0.41
Pde6bP23440 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pde6bP23440 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Pde6bP23440 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pde6bP23440 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pde6bP23440 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pde6bP23440 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pde6bP23440 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pde6bP23440 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pde6bP23440 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pde6bP23440 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pde6bP23440 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pde6bP23440 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pde6bP23440 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pde6bP23440 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Pde6bP23440 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 92.1 ms