Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Hmgn1P18608 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hmgn1P18608 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Hmgn1P18608 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hmgn1P18608 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hmgn1P18608 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.86□□□□□ -0.03
Hmgn1P18608 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.85□□□□□ -0.03
Hmgn1P18608 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hmgn1P18608 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hmgn1P18608 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Hmgn1P18608 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hmgn1P18608 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hmgn1P18608 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Hmgn1P18608 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hmgn1P18608 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.85□□□□□ -0.03
Hmgn1P18608 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hmgn1P18608 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Hmgn1P18608 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hmgn1P18608 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.85□□□□□ -0.03
Hmgn1P18608 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hmgn1P18608 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC14.85□□□□□ -0.03
Hmgn1P18608 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Hmgn1P18608 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hmgn1P18608 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hmgn1P18608 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hmgn1P18608 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hmgn1P18608 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hmgn1P18608 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Hmgn1P18608 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hmgn1P18608 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hmgn1P18608 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hmgn1P18608 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Hmgn1P18608 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.84□□□□□ -0.03
Hmgn1P18608 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14.84□□□□□ -0.03
Hmgn1P18608 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hmgn1P18608 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hmgn1P18608 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.84□□□□□ -0.03
Hmgn1P18608 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hmgn1P18608 Phf7-203ENSMUST00000226565 1971 ntBASIC14.84□□□□□ -0.03
Hmgn1P18608 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hmgn1P18608 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC14.84□□□□□ -0.03
Hmgn1P18608 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hmgn1P18608 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hmgn1P18608 Gm12527-201ENSMUST00000117967 564 ntBASIC14.84□□□□□ -0.03
Hmgn1P18608 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC14.84□□□□□ -0.03
Hmgn1P18608 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC14.84□□□□□ -0.03
Hmgn1P18608 Gm36967-201ENSMUST00000193814 266 ntBASIC14.84□□□□□ -0.03
Hmgn1P18608 AC135637.1-201ENSMUST00000227750 365 ntBASIC14.84□□□□□ -0.03
Hmgn1P18608 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Hmgn1P18608 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.84□□□□□ -0.03
Hmgn1P18608 AC163637.1-201ENSMUST00000215491 1894 ntBASIC14.84□□□□□ -0.03
Hmgn1P18608 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hmgn1P18608 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Hmgn1P18608 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Hmgn1P18608 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Hmgn1P18608 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Hmgn1P18608 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.03
Hmgn1P18608 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Hmgn1P18608 Slc35b2-202ENSMUST00000223987 1766 ntBASIC14.83□□□□□ -0.03
Hmgn1P18608 Gm44729-201ENSMUST00000206759 2052 ntBASIC14.83□□□□□ -0.03
Hmgn1P18608 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Hmgn1P18608 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Hmgn1P18608 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hmgn1P18608 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hmgn1P18608 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Hmgn1P18608 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Hmgn1P18608 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hmgn1P18608 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hmgn1P18608 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Hmgn1P18608 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hmgn1P18608 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC14.83□□□□□ -0.04
Hmgn1P18608 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC14.83□□□□□ -0.04
Hmgn1P18608 Gm16042-201ENSMUST00000204813 1247 ntBASIC14.83□□□□□ -0.04
Hmgn1P18608 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC14.83□□□□□ -0.04
Hmgn1P18608 AC164629.5-201ENSMUST00000220387 632 ntBASIC14.83□□□□□ -0.04
Hmgn1P18608 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hmgn1P18608 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hmgn1P18608 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Hmgn1P18608 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Hmgn1P18608 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hmgn1P18608 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hmgn1P18608 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC14.83□□□□□ -0.04
Hmgn1P18608 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Hmgn1P18608 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Hmgn1P18608 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.83□□□□□ -0.04
Hmgn1P18608 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hmgn1P18608 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hmgn1P18608 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hmgn1P18608 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Hmgn1P18608 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Hmgn1P18608 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Hmgn1P18608 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Hmgn1P18608 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hmgn1P18608 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Hmgn1P18608 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hmgn1P18608 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Hmgn1P18608 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hmgn1P18608 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Hmgn1P18608 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
Hmgn1P18608 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms