Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccl3P10855 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Ccl3P10855 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccl3P10855 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccl3P10855 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccl3P10855 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC14.29□□□□□ -0.12
Ccl3P10855 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccl3P10855 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccl3P10855 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
Ccl3P10855 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC14.29□□□□□ -0.12
Ccl3P10855 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Ccl3P10855 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccl3P10855 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccl3P10855 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC14.28□□□□□ -0.12
Ccl3P10855 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccl3P10855 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccl3P10855 Gm4609-201ENSMUST00000106443 1002 ntBASIC14.28□□□□□ -0.12
Ccl3P10855 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccl3P10855 Gm5138-201ENSMUST00000113842 1002 ntBASIC14.28□□□□□ -0.12
Ccl3P10855 Gm15191-201ENSMUST00000117933 1000 ntBASIC14.28□□□□□ -0.12
Ccl3P10855 Gm12182-201ENSMUST00000118655 1008 ntBASIC14.28□□□□□ -0.12
Ccl3P10855 Gm11764-201ENSMUST00000120221 623 ntBASIC14.28□□□□□ -0.12
Ccl3P10855 Gm13882-201ENSMUST00000120886 1002 ntBASIC14.28□□□□□ -0.12
Ccl3P10855 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC14.28□□□□□ -0.12
Ccl3P10855 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.28□□□□□ -0.12
Ccl3P10855 Gm10284-201ENSMUST00000145057 1005 ntBASIC14.28□□□□□ -0.12
Ccl3P10855 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ccl3P10855 Gm25911-201ENSMUST00000157621 56 ntBASIC14.28□□□□□ -0.12
Ccl3P10855 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC14.28□□□□□ -0.12
Ccl3P10855 Gm10481-201ENSMUST00000179228 1002 ntBASIC14.28□□□□□ -0.12
Ccl3P10855 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccl3P10855 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC14.28□□□□□ -0.12
Ccl3P10855 Gm2574-201ENSMUST00000181051 1002 ntBASIC14.28□□□□□ -0.12
Ccl3P10855 Gm3200-201ENSMUST00000181493 1002 ntBASIC14.28□□□□□ -0.12
Ccl3P10855 Gm8825-201ENSMUST00000182565 998 ntBASIC14.28□□□□□ -0.12
Ccl3P10855 Gm4518-201ENSMUST00000182638 718 ntBASIC14.28□□□□□ -0.12
Ccl3P10855 Gm8330-201ENSMUST00000182754 1008 ntBASIC14.28□□□□□ -0.12
Ccl3P10855 Gm4575-201ENSMUST00000182991 1002 ntBASIC14.28□□□□□ -0.12
Ccl3P10855 Gm8709-201ENSMUST00000183230 1012 ntBASIC14.28□□□□□ -0.12
Ccl3P10855 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC14.28□□□□□ -0.12
Ccl3P10855 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Ccl3P10855 AC154621.1-201ENSMUST00000226155 1119 ntBASIC14.28□□□□□ -0.12
Ccl3P10855 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccl3P10855 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccl3P10855 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccl3P10855 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccl3P10855 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccl3P10855 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ccl3P10855 Gm10293-201ENSMUST00000076317 1002 ntBASIC14.28□□□□□ -0.12
Ccl3P10855 Gm6316-201ENSMUST00000082064 1020 ntBASIC14.28□□□□□ -0.12
Ccl3P10855 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Ccl3P10855 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ccl3P10855 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ccl3P10855 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccl3P10855 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccl3P10855 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccl3P10855 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccl3P10855 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Ccl3P10855 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC14.27□□□□□ -0.13
Ccl3P10855 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14.27□□□□□ -0.13
Ccl3P10855 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ccl3P10855 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC14.27□□□□□ -0.13
Ccl3P10855 Mir3113-201ENSMUST00000175478 76 ntBASIC14.27□□□□□ -0.13
Ccl3P10855 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC14.27□□□□□ -0.13
Ccl3P10855 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ccl3P10855 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccl3P10855 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccl3P10855 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccl3P10855 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Ccl3P10855 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ccl3P10855 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccl3P10855 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Ccl3P10855 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccl3P10855 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccl3P10855 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccl3P10855 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Ccl3P10855 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccl3P10855 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccl3P10855 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccl3P10855 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccl3P10855 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC14.26□□□□□ -0.13
Ccl3P10855 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccl3P10855 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Ccl3P10855 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Ccl3P10855 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC14.26□□□□□ -0.13
Ccl3P10855 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ccl3P10855 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ccl3P10855 Gm5682-201ENSMUST00000173402 505 ntBASIC14.26□□□□□ -0.13
Ccl3P10855 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ccl3P10855 Ndufaf2-202ENSMUST00000223734 556 ntBASIC14.26□□□□□ -0.13
Ccl3P10855 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccl3P10855 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccl3P10855 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccl3P10855 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC14.26□□□□□ -0.13
Ccl3P10855 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ccl3P10855 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Ccl3P10855 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Ccl3P10855 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccl3P10855 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Ccl3P10855 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms