Protein–RNA interactions for Protein: P0CW02

Ly6c1, Lymphocyte antigen 6C1, mousemouse

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ly6c1P0CW02 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ly6c1P0CW02 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ly6c1P0CW02 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ly6c1P0CW02 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ly6c1P0CW02 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ly6c1P0CW02 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ly6c1P0CW02 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Ly6c1P0CW02 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Ly6c1P0CW02 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ly6c1P0CW02 Gm17971-201ENSMUST00000190239 806 ntBASIC13.52□□□□□ -0.25
Ly6c1P0CW02 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ly6c1P0CW02 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ly6c1P0CW02 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ly6c1P0CW02 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ly6c1P0CW02 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ly6c1P0CW02 Gm5049-201ENSMUST00000195878 1590 ntBASIC13.52□□□□□ -0.25
Ly6c1P0CW02 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ly6c1P0CW02 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ly6c1P0CW02 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ly6c1P0CW02 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Ly6c1P0CW02 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC13.52□□□□□ -0.25
Ly6c1P0CW02 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Ly6c1P0CW02 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
Ly6c1P0CW02 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Ly6c1P0CW02 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ly6c1P0CW02 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ly6c1P0CW02 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ly6c1P0CW02 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ly6c1P0CW02 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ly6c1P0CW02 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ly6c1P0CW02 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ly6c1P0CW02 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ly6c1P0CW02 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Ly6c1P0CW02 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ly6c1P0CW02 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ly6c1P0CW02 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ly6c1P0CW02 Gm32996-201ENSMUST00000199828 1447 ntBASIC13.51□□□□□ -0.25
Ly6c1P0CW02 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ly6c1P0CW02 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC13.51□□□□□ -0.25
Ly6c1P0CW02 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC13.51□□□□□ -0.25
Ly6c1P0CW02 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Ly6c1P0CW02 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ly6c1P0CW02 AC153889.1-201ENSMUST00000219257 330 ntBASIC13.51□□□□□ -0.25
Ly6c1P0CW02 AC114585.2-202ENSMUST00000228094 426 ntBASIC13.51□□□□□ -0.25
Ly6c1P0CW02 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ly6c1P0CW02 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC13.51□□□□□ -0.25
Ly6c1P0CW02 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ly6c1P0CW02 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ly6c1P0CW02 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC13.51□□□□□ -0.25
Ly6c1P0CW02 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ly6c1P0CW02 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Ly6c1P0CW02 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ly6c1P0CW02 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ly6c1P0CW02 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ly6c1P0CW02 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ly6c1P0CW02 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ly6c1P0CW02 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ly6c1P0CW02 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ly6c1P0CW02 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ly6c1P0CW02 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Ly6c1P0CW02 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ly6c1P0CW02 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ly6c1P0CW02 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ly6c1P0CW02 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Ly6c1P0CW02 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Ly6c1P0CW02 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ly6c1P0CW02 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Ly6c1P0CW02 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Ly6c1P0CW02 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ly6c1P0CW02 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC13.5□□□□□ -0.25
Ly6c1P0CW02 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ly6c1P0CW02 Il4-204ENSMUST00000150568 605 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ly6c1P0CW02 Rprl3-201ENSMUST00000157400 290 ntBASIC13.5□□□□□ -0.25
Ly6c1P0CW02 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC13.5□□□□□ -0.25
Ly6c1P0CW02 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC13.5□□□□□ -0.25
Ly6c1P0CW02 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC13.5□□□□□ -0.25
Ly6c1P0CW02 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC13.5□□□□□ -0.25
Ly6c1P0CW02 Gm27867-201ENSMUST00000184778 125 ntBASIC13.5□□□□□ -0.25
Ly6c1P0CW02 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC13.5□□□□□ -0.25
Ly6c1P0CW02 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC13.5□□□□□ -0.25
Ly6c1P0CW02 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ly6c1P0CW02 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ly6c1P0CW02 Spr-ps1-201ENSMUST00000089584 605 ntBASIC13.5□□□□□ -0.25
Ly6c1P0CW02 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ly6c1P0CW02 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ly6c1P0CW02 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Ly6c1P0CW02 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ly6c1P0CW02 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ly6c1P0CW02 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ly6c1P0CW02 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ly6c1P0CW02 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ly6c1P0CW02 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
Ly6c1P0CW02 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ly6c1P0CW02 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ly6c1P0CW02 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ly6c1P0CW02 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ly6c1P0CW02 Gm6858-201ENSMUST00000208582 1468 ntBASIC13.49□□□□□ -0.25
Ly6c1P0CW02 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ly6c1P0CW02 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Ly6c1P0CW02 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms